Gene detail

Detailed information of evm.model.Contig123.267 in Hemicorallium imperiale

Genomic Location: Contig123:1203378...1205015
NR annotation: KAF9404759.1, hypothetical protein HW555_014180 [Spodoptera exigua]
Species Hemicorallium imperiale · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

No sequence record for evm.model.Contig123.267 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q6KI60	Small ribosomal subunit protein uS9 OS=Mycoplasma mobile (strain ATCC 43663 / 163K / NCTC 11711) OX=267748 GN=rpsI PE=3 SV=1
Q98Q72	Small ribosomal subunit protein uS9 OS=Mycoplasmopsis pulmonis (strain UAB CTIP) OX=272635 GN=rpsI PE=3 SV=1
Q4A6X3	Small ribosomal subunit protein uS9 OS=Mycoplasmopsis synoviae (strain 53) OX=262723 GN=rpsI PE=3 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0008178 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00572 all species →	Ribosomal_L13	Ribosomal protein L13	Family	Interproscan
PF00380 all species →	Ribosomal_S9	Ribosomal protein S9/S16	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036899 all species →	Homologous_superfamily	Large ribosomal subunit protein uL13 superfamily	Interproscan
IPR005822 all species →	Family	Large ribosomal subunit protein uL13	Interproscan
IPR020574 all species →	Conserved_site	Small ribosomal subunit protein uS9, conserved site	Interproscan
IPR000754 all species →	Family	Small ribosomal subunit protein uS9	Interproscan
IPR014721 all species →	Homologous_superfamily	Small ribosomal subunit protein uS5 domain 2-type fold, subgroup	Interproscan
IPR023035 all species →	Family	Small ribosomal subunit protein uS9, bacterial/plastid	Interproscan
IPR005823 all species →	Family	Large ribosomal subunit protein uL13, bacterial-type	Interproscan
IPR020568 all species →	Homologous_superfamily	Ribosomal protein uS5 domain 2-type superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21569 all species →	RIBOSOMAL PROTEIN S9	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003735 all species →	Molecular Function	structural constituent of ribosome	Interproscan
GO:0005840 all species →	Cellular Component	ribosome	Interproscan
GO:0006412 all species →	Biological Process	translation	Interproscan
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan
GO:0015935 all species →	Cellular Component	small ribosomal subunit	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K02996	RP-S9, MRPS9, rpsI; small subunit ribosomal protein S9	-	Ribosome	ko03011	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.