Genomic Location: Contig123:1216037...1217812
NR annotation: XP_023226508.1, LOW QUALITY PROTEIN: uncharacterized protein LOC111627170 [Centruroides sculpturatus]
Species abbreviation HIMPE · all data for this species · gene families
evm.model.Contig123.276 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| Q4A5I8 | Small ribosomal subunit protein uS13 OS=Mycoplasmopsis synoviae (strain 53) OX=262723 GN=rpsM PE=3 SV=1 |
| A5IYW1 | Small ribosomal subunit protein uS13 OS=Mycoplasmopsis agalactiae (strain NCTC 10123 / CIP 59.7 / PG2) OX=347257 GN=rpsM PE=3 SV=1 |
| Q6KI31 | Small ribosomal subunit protein uS13 OS=Mycoplasma mobile (strain ATCC 43663 / 163K / NCTC 11711) OX=267748 GN=rpsM PE=3 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0012164 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00416 all species → | Ribosomal_S13 | Ribosomal protein S13/S18 | Family | Interproscan |
| PF01193 all species → | RNA_pol_L | RNA polymerase Rpb3/Rpb11 dimerisation domain | Domain | Interproscan |
| PF00411 all species → | Ribosomal_S11 | Ribosomal protein S11 | Family | Interproscan |
| PF03118 all species → | RNA_pol_A_CTD | Bacterial RNA polymerase, alpha chain C terminal domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001971 all species → | Family | Small ribosomal subunit protein uS11 | Interproscan |
| IPR001892 all species → | Family | Small ribosomal subunit protein uS13 | Interproscan |
| IPR036967 all species → | Homologous_superfamily | Small ribosomal subunit protein uS11 superfamily | Interproscan |
| IPR018269 all species → | Conserved_site | Small ribosomal subunit protein uS13, conserved site | Interproscan |
| IPR036603 all species → | Homologous_superfamily | RNA polymerase, RBP11-like subunit | Interproscan |
| IPR027437 all species → | Homologous_superfamily | Small ribosomal subunit protein uS13, C-terminal | Interproscan |
| IPR011263 all species → | Domain | DNA-directed RNA polymerase, RpoA/D/Rpb3-type | Interproscan |
| IPR019980 all species → | Family | Small ribosomal subunit protein uS13, bacterial-type | Interproscan |
| IPR036643 all species → | Homologous_superfamily | DNA-directed RNA polymerase, insert domain superfamily | Interproscan |
| IPR018102 all species → | Conserved_site | Small ribosomal subunit protein uS11, conserved site | Interproscan |
| IPR011260 all species → | Domain | RNA polymerase, alpha subunit, C-terminal | Interproscan |
| IPR010979 all species → | Homologous_superfamily | Small ribosomal subunit protein uS13-like, H2TH | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR10871 all species → | 30S RIBOSOMAL PROTEIN S13/40S RIBOSOMAL PROTEIN S18 | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0003735 all species → | Molecular Function | structural constituent of ribosome | Interproscan |
| GO:0005840 all species → | Cellular Component | ribosome | Interproscan |
| GO:0006412 all species → | Biological Process | translation | Interproscan |
| GO:0003723 all species → | Molecular Function | RNA binding | Interproscan |
| GO:0006351 all species → | Biological Process | DNA-templated transcription | Interproscan |
| GO:0046983 all species → | Molecular Function | protein dimerization activity | Interproscan |
| GO:0005829 all species → | Cellular Component | cytosol | Interproscan |
| GO:0015935 all species → | Cellular Component | small ribosomal subunit | Interproscan |
| GO:0003899 all species → | Molecular Function | DNA-directed 5'-3' RNA polymerase activity | Interproscan |
| GO:0003677 all species → | Molecular Function | DNA binding | Interproscan |
| GO:0003676 all species → | Molecular Function | nucleic acid binding | Interproscan |
evm.model.Contig123.276.
