Detailed information of evm.model.Contig123.288 in Hemicorallium imperiale

Genomic Location: Contig123:1245649...1246362
NR annotation: CRH46523.1, tryptophanyl-tRNA synthetase [Chlamydia trachomatis]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Contig123.288 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q98PH7Tryptophan--tRNA ligase OS=Mycoplasmopsis pulmonis (strain UAB CTIP) OX=272635 GN=trpS PE=3 SV=1
P00953Tryptophan--tRNA ligase OS=Geobacillus stearothermophilus OX=1422 GN=trpS PE=1 SV=1
Q8ERU2Tryptophan--tRNA ligase OS=Oceanobacillus iheyensis (strain DSM 14371 / CIP 107618 / JCM 11309 / KCTC 3954 / HTE831) OX=221109 GN=trpS PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004173 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00579
all species →		tRNA-synt_1btRNA synthetases class I (W and Y)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR014729
all species →		Homologous_superfamilyRossmann-like alpha/beta/alpha sandwich foldInterproscan
IPR002306
all species →		FamilyTryptophan-tRNA ligaseInterproscan
IPR050203
all species →		FamilyTryptophan--tRNA ligaseInterproscan
IPR002305
all species →		FamilyAminoacyl-tRNA synthetase, class IcInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43766
all species →		TRYPTOPHAN--TRNA LIGASE, MITOCHONDRIALInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000166
all species →		Molecular Functionnucleotide bindingInterproscan
GO:0004830
all species →		Molecular Functiontryptophan-tRNA ligase activityInterproscan
GO:0005524
all species →		Molecular FunctionATP bindingInterproscan
GO:0006436
all species →		Biological Processtryptophanyl-tRNA aminoacylationInterproscan
GO:0004812
all species →		Molecular Functionaminoacyl-tRNA ligase activityInterproscan
GO:0006418
all species →		Biological ProcesstRNA aminoacylation for protein translationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K03471rnhC; ribonuclease HIIIEC:3.1.26.4
DNA replication proteinsko03032deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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