Detailed information of evm.model.Contig123.299 in Hemicorallium imperiale

Genomic Location: Contig123:1288550...1293765
NR annotation: RTZ68116.1, MAG: ribose-phosphate pyrophosphokinase [Mycoplasmatota bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q6KHH3Serine hydroxymethyltransferase OS=Mycoplasma mobile (strain ATCC 43663 / 163K / NCTC 11711) OX=267748 GN=glyA PE=3 SV=1
A5IXK9Serine hydroxymethyltransferase OS=Mycoplasmopsis agalactiae (strain NCTC 10123 / CIP 59.7 / PG2) OX=347257 GN=glyA PE=3 SV=1
B3PN94Serine hydroxymethyltransferase OS=Metamycoplasma arthritidis (strain 158L3-1) OX=243272 GN=glyA PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13793Pribosyltran_NN-terminal domain of ribose phosphate pyrophosphokinaseDomainInterproscan
PF00156PribosyltranPhosphoribosyl transferase domainDomainInterproscan
PF00464SHMTSerine hydroxymethyltransferaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR019798Binding_siteSerine hydroxymethyltransferase, pyridoxal phosphate binding siteInterproscan
IPR029057Homologous_superfamilyPhosphoribosyltransferase-likeInterproscan
IPR049943FamilySerine hydroxymethyltransferase-likeInterproscan
IPR015424Homologous_superfamilyPyridoxal phosphate-dependent transferaseInterproscan
IPR000842Conserved_sitePhosphoribosyl pyrophosphate synthetase, conserved siteInterproscan
IPR015421Homologous_superfamilyPyridoxal phosphate-dependent transferase, major domainInterproscan
IPR005946FamilyRibose-phosphate pyrophosphokinaseInterproscan
IPR029099DomainRibose-phosphate pyrophosphokinase, N-terminal domainInterproscan
IPR000836DomainPhosphoribosyltransferase domainInterproscan
IPR039429DomainSerine hydroxymethyltransferase-like domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11680SERINE HYDROXYMETHYLTRANSFERASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0030170Molecular Functionpyridoxal phosphate bindingInterproscan
GO:0004372Molecular Functionglycine hydroxymethyltransferase activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006565Biological ProcessL-serine catabolic processInterproscan
GO:0006730Biological Processone-carbon metabolic processInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0019264Biological Processglycine biosynthetic process from serineInterproscan
GO:0046653Biological Processtetrahydrofolate metabolic processInterproscan
GO:0046655Biological Processfolic acid metabolic processInterproscan
GO:0050897Molecular Functioncobalt ion bindingInterproscan
GO:0070905Molecular Functionserine bindingInterproscan
GO:0000287Molecular Functionmagnesium ion bindingInterproscan
GO:0004749Molecular Functionribose phosphate diphosphokinase activityInterproscan
GO:0009156Biological Processribonucleoside monophosphate biosynthetic processInterproscan
GO:0044249Biological Processobsolete cellular biosynthetic processInterproscan
GO:0009165Biological Processnucleotide biosynthetic processInterproscan

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