Detailed information of evm.model.Contig123.33 in Hemicorallium imperiale

Genomic Location: Contig123:129735...130466
NR annotation: NQZ66246.1, deoxyribonuclease IV [Mycoplasmatales bacterium]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Contig123.33 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6KH96Probable endonuclease 4 OS=Mycoplasma mobile (strain ATCC 43663 / 163K / NCTC 11711) OX=267748 GN=nfo PE=3 SV=1
Q4A6S5Probable endonuclease 4 OS=Mycoplasmopsis synoviae (strain 53) OX=262723 GN=nfo PE=3 SV=1
A5IYT8Probable endonuclease 4 OS=Mycoplasmopsis agalactiae (strain NCTC 10123 / CIP 59.7 / PG2) OX=347257 GN=nfo PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008775 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01261
all species →		AP_endonuc_2Xylose isomerase-like TIM barrelDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001719
all species →		FamilyAP endonuclease 2Interproscan
IPR036237
all species →		Homologous_superfamilyXylose isomerase-like superfamilyInterproscan
IPR013022
all species →		DomainXylose isomerase-like, TIM barrel domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21445
all species →		ENDONUCLEASE IV ENDODEOXYRIBONUCLEASE IVInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003677
all species →		Molecular FunctionDNA bindingInterproscan
GO:0006281
all species →		Biological ProcessDNA repairInterproscan
GO:0008270
all species →		Molecular Functionzinc ion bindingInterproscan
GO:0003906
all species →		Molecular FunctionDNA-(apurinic or apyrimidinic site) endonuclease activityInterproscan
GO:0006284
all species →		Biological Processbase-excision repairInterproscan
GO:0008081
all species →		Molecular Functionphosphoric diester hydrolase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K01151nfo; deoxyribonuclease IVEC:3.1.21.2
DNA repair and recombination proteinsko03400deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP