Gene detail

Detailed information of evm.model.Contig123.38 in Hemicorallium imperiale

Genomic Location: Contig123:145038...146371
NR annotation: MCK5867083.1, 50S ribosomal protein L11 [Mycoplasmataceae bacterium]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q6KIF0	Large ribosomal subunit protein uL11 OS=Mycoplasma mobile (strain ATCC 43663 / 163K / NCTC 11711) OX=267748 GN=rplK PE=3 SV=2
Q4A5E0	Large ribosomal subunit protein uL11 OS=Mycoplasmopsis synoviae (strain 53) OX=262723 GN=rplK PE=3 SV=1
Q98RJ9	Large ribosomal subunit protein uL11 OS=Mycoplasmopsis pulmonis (strain UAB CTIP) OX=272635 GN=rplK PE=3 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00687	Ribosomal_L1	Ribosomal protein L1p/L10e family	Domain	Interproscan
PF00298	Ribosomal_L11	Ribosomal protein L11, RNA binding domain	Domain	Interproscan
PF03946	Ribosomal_L11_N	Ribosomal protein L11, N-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036769	Homologous_superfamily	Large ribosomal subunit protein uL11, C-terminal domain superfamily	Interproscan
IPR028364	Family	Ribosomal protein uL1/ribosomal biogenesis protein	Interproscan
IPR036796	Homologous_superfamily	Large ribosomal subunit protein uL11, N-terminal domain superfamily	Interproscan
IPR023674	Homologous_superfamily	Ribosomal protein uL1-like	Interproscan
IPR006519	Family	Large ribosomal subunit protein uL11, bacterial-type	Interproscan
IPR000911	Family	Ribosomal protein uL11	Interproscan
IPR016095	Homologous_superfamily	Large ribosomal subunit protein uL1, 3-layer alpha/beta-sandwich domain	Interproscan
IPR020783	Domain	Large ribosomal subunit protein uL11, C-terminal	Interproscan
IPR020785	Conserved_site	Large ribosomal subunit protein uL11, conserved site	Interproscan
IPR020784	Domain	Large ribosomal subunit protein uL11, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR36427	54S RIBOSOMAL PROTEIN L1, MITOCHONDRIAL	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003735	Molecular Function	structural constituent of ribosome	Interproscan
GO:0005840	Cellular Component	ribosome	Interproscan
GO:0006412	Biological Process	translation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K02863	RP-L1, MRPL1, rplA; large subunit ribosomal protein L1	-	Ribosome	ko03011	deepkoala