Detailed information of evm.model.Contig123.45 in Hemicorallium imperiale

Genomic Location: Contig123:179070...179673
NR annotation: MBQ3308002.1, cytidine deaminase [Bacilli bacterium]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Contig123.45 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9KD53Cytidine deaminase OS=Halalkalibacterium halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) OX=272558 GN=cdd PE=3 SV=1
Q54I82Probable cytidine deaminase OS=Dictyostelium discoideum OX=44689 GN=cda PE=3 SV=1
P75051Cytidine deaminase OS=Mycoplasma pneumoniae (strain ATCC 29342 / M129 / Subtype 1) OX=272634 GN=cdd PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007505 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00383
all species →		dCMP_cyt_deam_1Cytidine and deoxycytidylate deaminase zinc-binding regionDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002125
all species →		DomainCytidine and deoxycytidylate deaminase domainInterproscan
IPR050202
all species →		FamilyCytidine and Deoxycytidylate DeaminaseInterproscan
IPR016193
all species →		Homologous_superfamilyCytidine deaminase-likeInterproscan
IPR016192
all species →		Binding_siteAPOBEC/CMP deaminase, zinc-bindingInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11644
all species →		CYTIDINE DEAMINASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004126
all species →		Molecular Functioncytidine deaminase activityInterproscan
GO:0005829
all species →		Cellular ComponentcytosolInterproscan
GO:0008270
all species →		Molecular Functionzinc ion bindingInterproscan
GO:0009972
all species →		Biological Processcytidine deaminationInterproscan
GO:0003824
all species →		Molecular Functioncatalytic activityInterproscan
GO:0016787
all species →		Molecular Functionhydrolase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Contig123.45.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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