Gene detail

Detailed information of evm.model.Contig123.55 in Hemicorallium imperiale

Genomic Location: Contig123:214491...215280
NR annotation: RTZ68737.1, MAG: energy-coupling factor transporter ATPase [Mycoplasmatota bacterium]
Species Hemicorallium imperiale · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

No sequence record for evm.model.Contig123.55 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q98QH5	Energy-coupling factor transporter ATP-binding protein EcfA1 OS=Mycoplasmopsis pulmonis (strain UAB CTIP) OX=272635 GN=ecfA1 PE=3 SV=1
Q4A5A5	Energy-coupling factor transporter ATP-binding protein EcfA1 OS=Mycoplasmopsis synoviae (strain 53) OX=262723 GN=ecfA1 PE=3 SV=1
Q6KHL1	Energy-coupling factor transporter ATP-binding protein EcfA1 OS=Mycoplasma mobile (strain ATCC 43663 / 163K / NCTC 11711) OX=267748 GN=ecfA1 PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003266 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00156 all species →	Pribosyltran	Phosphoribosyl transferase domain	Domain	Interproscan
PF00005 all species →	ABC_tran	ABC transporter	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000836 all species →	Domain	Phosphoribosyltransferase domain	Interproscan
IPR029057 all species →	Homologous_superfamily	Phosphoribosyltransferase-like	Interproscan
IPR050095 all species →	Family	Energy-coupling factor transporter ATP-binding	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR003439 all species →	Domain	ABC transporter-like, ATP-binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43553 all species →	HEAVY METAL TRANSPORTER	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0005887 all species →	Cellular Component	plasma membrane	Interproscan
GO:0042626 all species →	Molecular Function	ATPase-coupled transmembrane transporter activity	Interproscan
GO:0043190 all species →	Cellular Component	ATP-binding cassette (ABC) transporter complex	Interproscan
GO:0016887 all species →	Molecular Function	ATP hydrolysis activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K09013	sufC; Fe-S cluster assembly ATP-binding protein	-	Transporters	ko02000	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.