Detailed information of evm.model.Contig123.59 in Hemicorallium imperiale

Genomic Location: Contig123:219369...220763
NR annotation: MCK5866780.1, alanine--tRNA ligase [Mycoplasmataceae bacterium]
Species abbreviation HIMPE · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Contig123.59 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q98Q12Alanine--tRNA ligase OS=Mycoplasmopsis pulmonis (strain UAB CTIP) OX=272635 GN=alaS PE=3 SV=1
Q601M2Alanine--tRNA ligase OS=Mesomycoplasma hyopneumoniae (strain 232) OX=295358 GN=alaS PE=3 SV=1
Q6KHK5Alanine--tRNA ligase OS=Mycoplasma mobile (strain ATCC 43663 / 163K / NCTC 11711) OX=267748 GN=alaS PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0025974 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01411
all species →		tRNA-synt_2ctRNA synthetases class II (A)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR018164
all species →		DomainAlanyl-tRNA synthetase, class IIc, N-terminalInterproscan
IPR018162
all species →		Homologous_superfamilyAlanine-tRNA ligase, class IIc, anti-codon-binding domain superfamilyInterproscan
IPR002318
all species →		FamilyAlanine-tRNA ligase, class IIcInterproscan
IPR050058
all species →		FamilyAlanine--tRNA ligaseInterproscan
IPR009000
all species →		Homologous_superfamilyTranslation protein, beta-barrel domain superfamilyInterproscan
IPR018165
all species →		DomainAlanyl-tRNA synthetase, class IIc, core domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11777
all species →		ALANYL-TRNA SYNTHETASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000166
all species →		Molecular Functionnucleotide bindingInterproscan
GO:0004813
all species →		Molecular Functionalanine-tRNA ligase activityInterproscan
GO:0005524
all species →		Molecular FunctionATP bindingInterproscan
GO:0006419
all species →		Biological Processalanyl-tRNA aminoacylationInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0002161
all species →		Molecular Functionaminoacyl-tRNA editing activityInterproscan
GO:0005829
all species →		Cellular ComponentcytosolInterproscan
GO:0003676
all species →		Molecular Functionnucleic acid bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Contig123.59.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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