Detailed information of evm.model.Contig123.65 in Hemicorallium imperiale

Genomic Location: Contig123:231114...231863
NR annotation: MCK5806863.1, aspartate--tRNA ligase [Mycoplasmataceae bacterium]
Species abbreviation HIMPE · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Contig123.65 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8EWB7Aspartate--tRNA ligase OS=Malacoplasma penetrans (strain HF-2) OX=272633 GN=aspS PE=3 SV=1
Q72KH6Aspartate--tRNA ligase OS=Thermus thermophilus (strain ATCC BAA-163 / DSM 7039 / HB27) OX=262724 GN=aspS PE=3 SV=1
Q5SKD2Aspartate--tRNA(Asp) ligase OS=Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8) OX=300852 GN=aspS1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0015669 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00152
all species →
tRNA-synt_2tRNA synthetases class II (D, K and N) DomainInterproscan
PF02938
all species →
GADGAD domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR004115
all species →
Homologous_superfamilyGAD-like domain superfamilyInterproscan
IPR045864
all species →
Homologous_superfamilyClass II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)Interproscan
IPR004364
all species →
DomainAminoacyl-tRNA synthetase, class II (D/K/N)Interproscan
IPR029351
all species →
DomainGAD domainInterproscan
IPR002312
all species →
FamilyAspartyl/Asparaginyl-tRNA synthetase, class IIbInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22594
all species →
ASPARTYL/LYSYL-TRNA SYNTHETASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004812
all species →
Molecular Functionaminoacyl-tRNA ligase activityInterproscan
GO:0005524
all species →
Molecular FunctionATP bindingInterproscan
GO:0005737
all species →
Cellular ComponentcytoplasmInterproscan
GO:0004815
all species →
Molecular Functionaspartate-tRNA ligase activityInterproscan
GO:0006422
all species →
Biological Processaspartyl-tRNA aminoacylationInterproscan
GO:0000166
all species →
Molecular Functionnucleotide bindingInterproscan
GO:0006418
all species →
Biological ProcesstRNA aminoacylation for protein translationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Contig123.65.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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