Detailed information of evm.model.Contig123.66 in Hemicorallium imperiale

Genomic Location: Contig123:231897...232247
NR annotation: MCK5806863.1, aspartate--tRNA ligase [Mycoplasmataceae bacterium]
Species abbreviation HIMPE · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Contig123.66 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q74IX4Aspartate--tRNA ligase OS=Lactobacillus johnsonii (strain CNCM I-12250 / La1 / NCC 533) OX=257314 GN=aspS PE=3 SV=2
Q892B2Aspartate--tRNA ligase OS=Clostridium tetani (strain Massachusetts / E88) OX=212717 GN=aspS PE=3 SV=1
Q9CE80Aspartate--tRNA ligase OS=Lactococcus lactis subsp. lactis (strain IL1403) OX=272623 GN=aspS PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0015669 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01336
all species →		tRNA_anti-codonOB-fold nucleic acid binding domainDomainInterproscan
PF00152
all species →		tRNA-synt_2tRNA synthetases class II (D, K and N) DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR012340
all species →		Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR004365
all species →		DomainOB-fold nucleic acid binding domain, AA-tRNA synthetase-typeInterproscan
IPR045864
all species →		Homologous_superfamilyClass II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)Interproscan
IPR004364
all species →		DomainAminoacyl-tRNA synthetase, class II (D/K/N)Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22594
all species →		ASPARTYL/LYSYL-TRNA SYNTHETASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003676
all species →		Molecular Functionnucleic acid bindingInterproscan
GO:0000166
all species →		Molecular Functionnucleotide bindingInterproscan
GO:0004812
all species →		Molecular Functionaminoacyl-tRNA ligase activityInterproscan
GO:0005524
all species →		Molecular FunctionATP bindingInterproscan
GO:0006418
all species →		Biological ProcesstRNA aminoacylation for protein translationInterproscan
GO:0004815
all species →		Molecular Functionaspartate-tRNA ligase activityInterproscan
GO:0006422
all species →		Biological Processaspartyl-tRNA aminoacylationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Contig123.66.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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