Detailed information of evm.model.Contig123.81 in Hemicorallium imperiale

Genomic Location: Contig123:282845...283153
NR annotation: MCK5945990.1, RluA family pseudouridine synthase [Mycoplasmataceae bacterium]
Species abbreviation HIMPE · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Contig123.81 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
O67638Uncharacterized RNA pseudouridine synthase aq_1758 OS=Aquifex aeolicus (strain VF5) OX=224324 GN=aq_1758 PE=3 SV=1
Q45480Uncharacterized RNA pseudouridine synthase YlyB OS=Bacillus subtilis (strain 168) OX=224308 GN=ylyB PE=3 SV=3
P50513Ribosomal large subunit pseudouridine synthase D OS=Zymomonas mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4) OX=264203 GN=rluD PE=3 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003100 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00849
all species →		PseudoU_synth_2RNA pseudouridylate synthaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006224
all species →		Conserved_sitePseudouridine synthase, RluA-like, conserved siteInterproscan
IPR050188
all species →		FamilyRluA Pseudouridine SynthaseInterproscan
IPR020103
all species →		Homologous_superfamilyPseudouridine synthase, catalytic domain superfamilyInterproscan
IPR006145
all species →		DomainPseudouridine synthase, RsuA/RluA-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21600
all species →		MITOCHONDRIAL RNA PSEUDOURIDINE SYNTHASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0001522
all species →		Biological Processpseudouridine synthesisInterproscan
GO:0003723
all species →		Molecular FunctionRNA bindingInterproscan
GO:0009451
all species →		Biological ProcessRNA modificationInterproscan
GO:0009982
all species →		Molecular Functionpseudouridine synthase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Contig123.81.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP