Gene detail

Detailed information of evm.model.Contig123.89 in Hemicorallium imperiale

Genomic Location: Contig123:321631...322668
NR annotation: NQZ65882.1, ribonuclease R [Mycoplasmatales bacterium]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q98QL0	Ribonuclease R OS=Mycoplasmopsis pulmonis (strain UAB CTIP) OX=272635 GN=rnr PE=3 SV=1
Q9WZI1	Ribonuclease R OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=rnr PE=3 SV=1
O32231	Ribonuclease R OS=Bacillus subtilis (strain 168) OX=224308 GN=rnr PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00773	RNB	RNB domain	Domain	Interproscan
PF17876	CSD2	Cold shock domain	Domain	Interproscan
PF08206	OB_RNB	Ribonuclease B OB domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001900	Domain	Ribonuclease II/R	Interproscan
IPR050180	Family	RNR Ribonuclease	Interproscan
IPR040476	Domain	RNase II/RNase R, cold shock domain	Interproscan
IPR013223	Domain	Ribonuclease B, N-terminal OB domain	Interproscan
IPR012340	Homologous_superfamily	Nucleic acid-binding, OB-fold	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23355	RIBONUCLEASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0004540	Molecular Function	RNA nuclease activity	Interproscan
GO:0000175	Molecular Function	3'-5'-RNA exonuclease activity	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K02945	RP-S1, rpsA; small subunit ribosomal protein S1	-	Ribosome	ko03011	deepkoala