Detailed information of evm.model.Contig125.131 in Hemicorallium imperiale

Genomic Location: Contig125:390556...392045
NR annotation: SMB88091.1, phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [Desulfonispora thiosulfatigenes DSM 11270]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Contig125.131 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
O66567Imidazole glycerol phosphate synthase subunit HisF OS=Aquifex aeolicus (strain VF5) OX=224324 GN=hisF PE=3 SV=1
A3DJF7Imidazole glycerol phosphate synthase subunit HisF OS=Acetivibrio thermocellus (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) OX=203119 GN=hisF PE=3 SV=1
Q8R885Imidazole glycerol phosphate synthase subunit HisF OS=Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) OX=273068 GN=hisF PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0011846 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00977
all species →		His_biosynthHistidine biosynthesis proteinFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR023016
all species →		FamilyHisA/PriA, bacterial-typeInterproscan
IPR004651
all species →		FamilyHistidine biosynthesis, HisFInterproscan
IPR013785
all species →		Homologous_superfamilyAldolase-type TIM barrelInterproscan
IPR011060
all species →		Homologous_superfamilyRibulose-phosphate binding barrelInterproscan
IPR006062
all species →		FamilyHistidine biosynthesis proteinInterproscan
IPR050064
all species →		FamilyImidazole glycerol phosphate synthase HisA/HisFInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21235
all species →		IMIDAZOLE GLYCEROL PHOSPHATE SYNTHASE SUBUNIT HISF/H IGP SYNTHASE SUBUNIT HISF/HInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000105
all species →		Biological ProcessL-histidine biosynthetic processInterproscan
GO:0003949
all species →		Molecular Function1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activityInterproscan
GO:0000107
all species →		Molecular Functionimidazoleglycerol-phosphate synthase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K02500hisF; imidazole glycerol-phosphate synthase subunit HisFEC:4.3.2.10
Histidine metabolismko00340deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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