Genomic Location: Contig125:431404...432464
NR annotation: OED35048.1, hypothetical protein AB834_05305 [PVC group bacterium (ex Bugula neritina AB1)]
Species Hemicorallium imperiale · all data for this species · gene families
evm.model.Contig125.150 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| O67444 | Uncharacterized RNA pseudouridine synthase aq_1464 OS=Aquifex aeolicus (strain VF5) OX=224324 GN=aq_1464 PE=3 SV=1 |
| O05668 | Uncharacterized RNA pseudouridine synthase ML1370 OS=Mycobacterium leprae (strain TN) OX=272631 GN=ML1370 PE=3 SV=1 |
| P9WHQ0 | Uncharacterized RNA pseudouridine synthase MT1751.1 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) OX=83331 GN=MT1751.1 PE=3 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0013472 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00849 all species → | PseudoU_synth_2 | RNA pseudouridylate synthase | Family | Interproscan |
| PF01588 all species → | tRNA_bind | Putative tRNA binding domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000748 all species → | Family | Pseudouridine synthase, RsuA/RluB/E/F | Interproscan |
| IPR006145 all species → | Domain | Pseudouridine synthase, RsuA/RluA-like | Interproscan |
| IPR020094 all species → | Homologous_superfamily | Pseudouridine synthase TruA/RsuA/RluB/E/F, N-terminal | Interproscan |
| IPR002547 all species → | Domain | tRNA-binding domain | Interproscan |
| IPR012340 all species → | Homologous_superfamily | Nucleic acid-binding, OB-fold | Interproscan |
| IPR050343 all species → | Family | Ribosomal RNA Pseudouridine Synthase RsuA | Interproscan |
| IPR042092 all species → | Homologous_superfamily | Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain | Interproscan |
| IPR020103 all species → | Homologous_superfamily | Pseudouridine synthase, catalytic domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR47683 all species → | PSEUDOURIDINE SYNTHASE FAMILY PROTEIN-RELATED | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0001522 all species → | Biological Process | pseudouridine synthesis | Interproscan |
| GO:0003723 all species → | Molecular Function | RNA binding | Interproscan |
| GO:0009451 all species → | Biological Process | RNA modification | Interproscan |
| GO:0016866 all species → | Molecular Function | intramolecular transferase activity | Interproscan |
| GO:0009982 all species → | Molecular Function | pseudouridine synthase activity | Interproscan |
| GO:0000049 all species → | Molecular Function | tRNA binding | Interproscan |
evm.model.Contig125.150.
