Genomic Location: Contig125:66455...71488
NR annotation: OED36112.1, DNA polymerase I [PVC group bacterium (ex Bugula neritina AB1)]
Species Hemicorallium imperiale · all data for this species · gene families
evm.model.Contig125.18 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| Q59156 | DNA polymerase I OS=Caldicellulosiruptor bescii (strain ATCC BAA-1888 / DSM 6725 / KCTC 15123 / Z-1320) OX=521460 GN=polA PE=3 SV=2 |
| P00362 | Glyceraldehyde-3-phosphate dehydrogenase OS=Geobacillus stearothermophilus OX=1422 GN=gap PE=1 SV=5 |
| Q829W3 | Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NBRC 14893 / NCIMB 12804 / NRRL 8165 / MA-4680) OX=227882 GN=gap2 PE=1 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0002620 (this species only) · gene tree & orthology |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00044 all species → | Gp_dh_N | Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain | Domain | Interproscan |
| PF01367 all species → | 5_3_exonuc | 5'-3' exonuclease, C-terminal SAM fold | Domain | Interproscan |
| PF02800 all species → | Gp_dh_C | Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain | Domain | Interproscan |
| PF02739 all species → | 5_3_exonuc_N | 5'-3' exonuclease, N-terminal resolvase-like domain | Domain | Interproscan |
| PF00476 all species → | DNA_pol_A | DNA polymerase family A | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001098 all species → | Domain | DNA-directed DNA polymerase, family A, palm domain | Interproscan |
| IPR020045 all species → | Domain | DNA polymerase I-like, H3TH domain | Interproscan |
| IPR006424 all species → | Family | Glyceraldehyde-3-phosphate dehydrogenase, type I | Interproscan |
| IPR020828 all species → | Domain | Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain | Interproscan |
| IPR008918 all species → | Conserved_site | Helix-hairpin-helix motif, class 2 | Interproscan |
| IPR036291 all species → | Homologous_superfamily | NAD(P)-binding domain superfamily | Interproscan |
| IPR002298 all species → | Family | DNA polymerase A | Interproscan |
| IPR036279 all species → | Homologous_superfamily | 5'-3' exonuclease, C-terminal domain superfamily | Interproscan |
| IPR043502 all species → | Homologous_superfamily | DNA/RNA polymerase superfamily | Interproscan |
| IPR020831 all species → | Family | Glyceraldehyde/Erythrose phosphate dehydrogenase family | Interproscan |
| IPR012337 all species → | Homologous_superfamily | Ribonuclease H-like superfamily | Interproscan |
| IPR002421 all species → | Domain | 5'-3' exonuclease | Interproscan |
| IPR029060 all species → | Homologous_superfamily | PIN-like domain superfamily | Interproscan |
| IPR020829 all species → | Domain | Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain | Interproscan |
| IPR018320 all species → | Family | DNA polymerase 1 | Interproscan |
| IPR036397 all species → | Homologous_superfamily | Ribonuclease H superfamily | Interproscan |
| IPR020046 all species → | Domain | 5'-3' exonuclease, alpha-helical arch, N-terminal | Interproscan |
| IPR020830 all species → | Active_site | Glyceraldehyde 3-phosphate dehydrogenase, active site | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR43148 all species → | GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE 2 | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0003677 all species → | Molecular Function | DNA binding | Interproscan |
| GO:0003887 all species → | Molecular Function | DNA-directed DNA polymerase activity | Interproscan |
| GO:0006260 all species → | Biological Process | DNA replication | Interproscan |
| GO:0003824 all species → | Molecular Function | catalytic activity | Interproscan |
| GO:0006006 all species → | Biological Process | glucose metabolic process | Interproscan |
| GO:0016620 all species → | Molecular Function | oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | Interproscan |
| GO:0050661 all species → | Molecular Function | NADP binding | Interproscan |
| GO:0051287 all species → | Molecular Function | NAD binding | Interproscan |
| GO:0006261 all species → | Biological Process | DNA-templated DNA replication | Interproscan |
| GO:0004365 all species → | Molecular Function | glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity | Interproscan |
| GO:0008409 all species → | Molecular Function | 5'-3' exonuclease activity | Interproscan |
| GO:0003676 all species → | Molecular Function | nucleic acid binding | Interproscan |
evm.model.Contig125.18.
