Detailed information of evm.model.Contig125.18 in Hemicorallium imperiale

Genomic Location: Contig125:66455...71488
NR annotation: OED36112.1, DNA polymerase I [PVC group bacterium (ex Bugula neritina AB1)]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q59156DNA polymerase I OS=Caldicellulosiruptor bescii (strain ATCC BAA-1888 / DSM 6725 / KCTC 15123 / Z-1320) OX=521460 GN=polA PE=3 SV=2
P00362Glyceraldehyde-3-phosphate dehydrogenase OS=Geobacillus stearothermophilus OX=1422 GN=gap PE=1 SV=5
Q829W3Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NBRC 14893 / NCIMB 12804 / NRRL 8165 / MA-4680) OX=227882 GN=gap2 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00044Gp_dh_NGlyceraldehyde 3-phosphate dehydrogenase, NAD binding domainDomainInterproscan
PF013675_3_exonuc5'-3' exonuclease, C-terminal SAM foldDomainInterproscan
PF02800Gp_dh_CGlyceraldehyde 3-phosphate dehydrogenase, C-terminal domainDomainInterproscan
PF027395_3_exonuc_N5'-3' exonuclease, N-terminal resolvase-like domainDomainInterproscan
PF00476DNA_pol_ADNA polymerase family AFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001098DomainDNA-directed DNA polymerase, family A, palm domainInterproscan
IPR020045DomainDNA polymerase I-like, H3TH domainInterproscan
IPR006424FamilyGlyceraldehyde-3-phosphate dehydrogenase, type IInterproscan
IPR020828DomainGlyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domainInterproscan
IPR008918Conserved_siteHelix-hairpin-helix motif, class 2Interproscan
IPR036291Homologous_superfamilyNAD(P)-binding domain superfamilyInterproscan
IPR002298FamilyDNA polymerase AInterproscan
IPR036279Homologous_superfamily5'-3' exonuclease, C-terminal domain superfamilyInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR020831FamilyGlyceraldehyde/Erythrose phosphate dehydrogenase familyInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR002421Domain5'-3' exonucleaseInterproscan
IPR029060Homologous_superfamilyPIN-like domain superfamilyInterproscan
IPR020829DomainGlyceraldehyde 3-phosphate dehydrogenase, catalytic domainInterproscan
IPR018320FamilyDNA polymerase 1Interproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR020046Domain5'-3' exonuclease, alpha-helical arch, N-terminalInterproscan
IPR020830Active_siteGlyceraldehyde 3-phosphate dehydrogenase, active siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43148GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE 2Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003887Molecular FunctionDNA-directed DNA polymerase activityInterproscan
GO:0006260Biological ProcessDNA replicationInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0006006Biological Processglucose metabolic processInterproscan
GO:0016620Molecular Functionoxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptorInterproscan
GO:0050661Molecular FunctionNADP bindingInterproscan
GO:0051287Molecular FunctionNAD bindingInterproscan
GO:0006261Biological ProcessDNA-templated DNA replicationInterproscan
GO:0004365Molecular Functionglyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activityInterproscan
GO:0008409Molecular Function5'-3' exonuclease activityInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan

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