Detailed information of evm.model.Contig125.5 in Hemicorallium imperiale

Genomic Location: Contig125:6234...6626
NR annotation: NLW31284.1, glycine cleavage system protein GcvH [Fibrobacter sp.]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Contig125.5 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q72LB0Glycine cleavage system H protein OS=Thermus thermophilus (strain ATCC BAA-163 / DSM 7039 / HB27) OX=262724 GN=gcvH PE=3 SV=1
A1S966Glycine cleavage system H protein OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) OX=326297 GN=gcvH PE=3 SV=1
Q5SKW9Glycine cleavage system H protein OS=Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8) OX=300852 GN=gcvH PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004709 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01597
all species →		GCV_HGlycine cleavage H-proteinDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011053
all species →		Homologous_superfamilySingle hybrid motifInterproscan
IPR002930
all species →		FamilyGlycine cleavage system H-proteinInterproscan
IPR003016
all species →		Binding_site2-oxo acid dehydrogenase, lipoyl-binding siteInterproscan
IPR017453
all species →		FamilyGlycine cleavage system H-protein, subgroupInterproscan
IPR033753
all species →		FamilyGlycine cleavage system H-protein/SimiateInterproscan
IPR000089
all species →		DomainBiotin/lipoyl attachmentInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11715
all species →		GLYCINE CLEAVAGE SYSTEM H PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005960
all species →		Cellular Componentglycine cleavage complexInterproscan
GO:0019464
all species →		Biological Processglycine decarboxylation via glycine cleavage systemInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0009249
all species →		Biological Processprotein lipoylationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K02437gcvH, GCSH; glycine cleavage system H protein-Lipoic acid metabolismko00785deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP