Detailed information of evm.model.Contig128.2 in Hemicorallium imperiale

Genomic Location: Contig128:7707...8996
NR annotation: OGW14652.1, 3-isopropylmalate dehydratase [Nitrospinae bacterium RIFCSPLOWO2_12_FULL_47_7]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Contig128.2 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q94AR83-isopropylmalate dehydratase large subunit, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=IIL1 PE=1 SV=1
B4U7U53-isopropylmalate dehydratase large subunit OS=Hydrogenobaculum sp. (strain Y04AAS1) OX=380749 GN=leuC PE=3 SV=1
O670783-isopropylmalate dehydratase large subunit OS=Aquifex aeolicus (strain VF5) OX=224324 GN=leuC PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0013548 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00330
all species →		AconitaseAconitase family (aconitate hydratase)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011826
all species →		FamilyHomoaconitase/3-isopropylmalate dehydratase, large subunit, prokaryoticInterproscan
IPR018136
all species →		Binding_siteAconitase family, 4Fe-4S cluster binding siteInterproscan
IPR015931
all species →		Homologous_superfamilyAconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3Interproscan
IPR050067
all species →		FamilyIsopropylmalate dehydratase and related enzymesInterproscan
IPR006251
all species →		FamilyHomoaconitase/3-isopropylmalate dehydratase, large subunitInterproscan
IPR001030
all species →		DomainAconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domainInterproscan
IPR036008
all species →		Homologous_superfamilyAconitase, iron-sulfur domainInterproscan
IPR033941
all species →		Domain3-Isopropylmalate dehydratase, catalytic domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43822
all species →		HOMOACONITASE, MITOCHONDRIAL-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003861
all species →		Molecular Function3-isopropylmalate dehydratase activityInterproscan
GO:0009098
all species →		Biological ProcessL-leucine biosynthetic processInterproscan
GO:0051539
all species →		Molecular Function4 iron, 4 sulfur cluster bindingInterproscan
GO:0008652
all species →		Biological Processamino acid biosynthetic processInterproscan
GO:0016836
all species →		Molecular Functionhydro-lyase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K01703leuC, IPMI-L; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunitEC:4.2.1.33
EC:4.2.1.35
Glucosinolate biosynthesisko00966deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP