Detailed information of evm.model.Contig128.38 in Hemicorallium imperiale

Genomic Location: Contig128:84939...85844
NR annotation: OED34841.1, hypothetical protein AB834_05910 [PVC group bacterium (ex Bugula neritina AB1)]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Contig128.38 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9ZKC3Ribonucleoside-diphosphate reductase subunit beta OS=Helicobacter pylori (strain J99 / ATCC 700824) OX=85963 GN=nrdB PE=3 SV=1
P55983Ribonucleoside-diphosphate reductase subunit beta OS=Helicobacter pylori (strain ATCC 700392 / 26695) OX=85962 GN=nrdB PE=3 SV=1
O83092Ribonucleoside-diphosphate reductase subunit beta OS=Treponema pallidum (strain Nichols) OX=243276 GN=nrdB PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003090 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00268
all species →		Ribonuc_red_smRibonucleotide reductase, small chainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000358
all species →		FamilyRibonucleotide reductase small subunit familyInterproscan
IPR012348
all species →		Homologous_superfamilyRibonucleotide reductase-likeInterproscan
IPR033909
all species →		FamilyRibonucleotide reductase small subunitInterproscan
IPR009078
all species →		Homologous_superfamilyFerritin-like superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23409
all species →		RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SMALL CHAINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0009263
all species →		Biological Processdeoxyribonucleotide biosynthetic processInterproscan
GO:0016491
all species →		Molecular Functionoxidoreductase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K00526E1.17.4.1B, nrdB, nrdF; ribonucleoside-diphosphate reductase beta chainEC:1.17.4.1
DNA repair and recombination proteinsko03400deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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