Detailed information of evm.model.Contig128.45 in Hemicorallium imperiale

Genomic Location: Contig128:109791...110954
NR annotation: OED34206.1, 50S ribosomal protein L17 [PVC group bacterium (ex Bugula neritina AB1)]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Contig128.45 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q3A6L9Large ribosomal subunit protein bL17 OS=Syntrophotalea carbinolica (strain DSM 2380 / NBRC 103641 / GraBd1) OX=338963 GN=rplQ PE=3 SV=1
B3EGW2Large ribosomal subunit protein bL17 OS=Chlorobium limicola (strain DSM 245 / NBRC 103803 / 6330) OX=290315 GN=rplQ PE=3 SV=1
A1BJ06Large ribosomal subunit protein bL17 OS=Chlorobium phaeobacteroides (strain DSM 266 / SMG 266 / 2430) OX=290317 GN=rplQ PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004864 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01196
all species →		Ribosomal_L17Ribosomal protein L17FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR047859
all species →		Conserved_siteLarge ribosomal subunit protein bL17, conserved siteInterproscan
IPR000456
all species →		FamilyLarge ribosomal subunit protein bL17Interproscan
IPR036373
all species →		Homologous_superfamilyLarge ribosomal subunit protein bL17 superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14413
all species →		RIBOSOMAL PROTEIN L17Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003735
all species →		Molecular Functionstructural constituent of ribosomeInterproscan
GO:0005840
all species →		Cellular ComponentribosomeInterproscan
GO:0006412
all species →		Biological ProcesstranslationInterproscan
GO:0015934
all species →		Cellular Componentlarge ribosomal subunitInterproscan
GO:0022625
all species →		Cellular Componentcytosolic large ribosomal subunitInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Contig128.45.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP