Detailed information of evm.model.Contig128.50 in Hemicorallium imperiale

Genomic Location: Contig128:114095...116635
NR annotation: OED34197.1, preprotein translocase subunit SecY [PVC group bacterium (ex Bugula neritina AB1)]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Contig128.50 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
O66491Protein translocase subunit SecY OS=Aquifex aeolicus (strain VF5) OX=224324 GN=secY PE=1 SV=1
P38375Protein translocase subunit SecY OS=Halalkalibacterium halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) OX=272558 GN=secY PE=3 SV=2
Q9PJN1Protein translocase subunit SecY OS=Chlamydia muridarum (strain MoPn / Nigg) OX=243161 GN=secY PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0023292 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00828
all species →
Ribosomal_L27ARibosomal proteins 50S-L15, 50S-L18e, 60S-L27AFamilyInterproscan
PF00557
all species →
Peptidase_M24Metallopeptidase family M24DomainInterproscan
PF00344
all species →
SecYSecYFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002467
all species →
FamilyPeptidase M24A, methionine aminopeptidase, subfamily 1Interproscan
IPR021131
all species →
DomainLarge ribosomal subunit protein uL15/eL18Interproscan
IPR036227
all species →
Homologous_superfamilyLarge ribosomal subunit protein uL15/eL18 superfamilyInterproscan
IPR023201
all species →
Homologous_superfamilySecY domain superfamilyInterproscan
IPR030659
all species →
Conserved_siteSecY conserved siteInterproscan
IPR005749
all species →
FamilyLarge ribosomal subunit protein uL15, bacterial-typeInterproscan
IPR036005
all species →
Homologous_superfamilyCreatinase/aminopeptidase-likeInterproscan
IPR000994
all species →
DomainPeptidase M24Interproscan
IPR002208
all species →
FamilySecY/SEC61-alpha familyInterproscan
IPR026593
all species →
FamilyProtein translocase subunit SecYInterproscan
IPR030878
all species →
FamilyLarge ribosomal subunit protein uL15Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43330
all species →
METHIONINE AMINOPEPTIDASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005829
all species →
Cellular ComponentcytosolInterproscan
GO:0070006
all species →
Molecular Functionmetalloaminopeptidase activityInterproscan
GO:0070084
all species →
Biological Processobsolete protein initiator methionine removalInterproscan
GO:0006508
all species →
Biological ProcessproteolysisInterproscan
GO:0003735
all species →
Molecular Functionstructural constituent of ribosomeInterproscan
GO:0006412
all species →
Biological ProcesstranslationInterproscan
GO:0015934
all species →
Cellular Componentlarge ribosomal subunitInterproscan
GO:0015031
all species →
Biological Processprotein transportInterproscan
GO:0016020
all species →
Cellular ComponentmembraneInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Contig128.50.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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