Detailed information of evm.model.Contig130.12 in Hemicorallium imperiale

Genomic Location: Contig130:33811...35957
NR annotation: OED36178.1, ornithine decarboxylase [PVC group bacterium (ex Bugula neritina AB1)]
Species abbreviation HIMPE · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Contig130.12 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A0A0H2ZQT7Exodeoxyribonuclease WalJ OS=Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466) OX=373153 GN=walJ PE=1 SV=1
Q8DPL9Exodeoxyribonuclease WalJ OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) OX=171101 GN=walJ PE=3 SV=1
Q89AC6Diaminopimelate decarboxylase OS=Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp) OX=224915 GN=lysA PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0063115 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12706
all species →		Lactamase_B_2Beta-lactamase superfamily domainDomainInterproscan
PF02784
all species →		Orn_Arg_deC_NPyridoxal-dependent decarboxylase, pyridoxal binding domainDomainInterproscan
PF00278
all species →		Orn_DAP_Arg_deCPyridoxal-dependent decarboxylase, C-terminal sheet domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036866
all species →		Homologous_superfamilyRibonuclease Z/Hydroxyacylglutathione hydrolase-likeInterproscan
IPR000183
all species →		FamilyOrnithine/DAP/Arg decarboxylaseInterproscan
IPR009006
all species →		Homologous_superfamilyAlanine racemase/group IV decarboxylase, C-terminalInterproscan
IPR001279
all species →		DomainMetallo-beta-lactamaseInterproscan
IPR052533
all species →		FamilyWalJ/YycJ ExodeoxyribonucleaseInterproscan
IPR022644
all species →		DomainOrn/DAP/Arg decarboxylase 2, N-terminalInterproscan
IPR022643
all species →		DomainOrn/DAP/Arg decarboxylase 2, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47619
all species →		METALLO-HYDROLASE YYCJ-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003824
all species →		Molecular Functioncatalytic activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Contig130.12.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP