Detailed information of evm.model.Contig130.34 in Hemicorallium imperiale

Genomic Location: Contig130:78500...80914
NR annotation: OED34370.1, DNA gyrase subunit A [PVC group bacterium (ex Bugula neritina AB1)]
Species abbreviation HIMPE · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Contig130.34 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P94605DNA gyrase subunit A OS=Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / IAM 19013 / LMG 5710 / NBRC 13948 / NRRL B-527 / VKM B-1787 / 2291 / W) OX=272562 GN=gyrA PE=3 SV=2
O84192DNA gyrase subunit A OS=Chlamydia trachomatis serovar D (strain ATCC VR-885 / DSM 19411 / UW-3/Cx) OX=272561 GN=gyrA PE=3 SV=1
Q9PKK4DNA gyrase subunit A OS=Chlamydia muridarum (strain MoPn / Nigg) OX=243161 GN=gyrA PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0011147 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00521
all species →		DNA_topoisoIVDNA gyrase/topoisomerase IV, subunit AFamilyInterproscan
PF03989
all species →		DNA_gyraseA_CDNA gyrase C-terminal domain, beta-propellerRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002205
all species →		DomainDNA topoisomerase, type IIA, domain AInterproscan
IPR005743
all species →		FamilyDNA gyrase, subunit AInterproscan
IPR035516
all species →		Homologous_superfamilyDNA gyrase/topoisomerase IV, subunit A, C-terminalInterproscan
IPR050220
all species →		FamilyType II DNA TopoisomerasesInterproscan
IPR013760
all species →		Homologous_superfamilyDNA topoisomerase, type IIA-like domain superfamilyInterproscan
IPR013758
all species →		Homologous_superfamilyDNA topoisomerase, type IIA, domain A, alpha-betaInterproscan
IPR006691
all species →		RepeatDNA gyrase/topoisomerase IV, subunit A, C-terminal repeatInterproscan
IPR013757
all species →		Homologous_superfamilyDNA topoisomerase, type IIA, alpha-helical domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43493
all species →		DNA GYRASE/TOPOISOMERASE SUBUNIT AInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003677
all species →		Molecular FunctionDNA bindingInterproscan
GO:0003918
all species →		Molecular FunctionDNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activityInterproscan
GO:0005524
all species →		Molecular FunctionATP bindingInterproscan
GO:0006265
all species →		Biological ProcessDNA topological changeInterproscan
GO:0005694
all species →		Cellular ComponentchromosomeInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0009330
all species →		Cellular ComponentDNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complexInterproscan
GO:0006259
all species →		Biological ProcessDNA metabolic processInterproscan
GO:0003916
all species →		Molecular FunctionDNA topoisomerase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K02469gyrA; DNA gyrase subunit AEC:5.6.2.2
DNA repair and recombination proteinsko03400deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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