Detailed information of evm.model.Contig132.15 in Hemicorallium imperiale

Genomic Location: Contig132:41713...43788
NR annotation: MCG8478098.1, 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein [Spirochaetales bacterium]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Contig132.15 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A1S7L6Fatty acid oxidation complex subunit alpha OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) OX=326297 GN=fadJ PE=3 SV=1
Q87MM3Fatty acid oxidation complex subunit alpha OS=Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633) OX=223926 GN=fadJ PE=3 SV=1
Q5QXM1Fatty acid oxidation complex subunit alpha OS=Idiomarina loihiensis (strain ATCC BAA-735 / DSM 15497 / L2-TR) OX=283942 GN=fadJ PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003582 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00725
all species →
3HCDH3-hydroxyacyl-CoA dehydrogenase, C-terminal domainDomainInterproscan
PF00378
all species →
ECH_1Enoyl-CoA hydratase/isomeraseDomainInterproscan
PF02737
all species →
3HCDH_N3-hydroxyacyl-CoA dehydrogenase, NAD binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR008927
all species →
Homologous_superfamily6-phosphogluconate dehydrogenase-like, C-terminal domain superfamilyInterproscan
IPR006108
all species →
Domain3-hydroxyacyl-CoA dehydrogenase, C-terminalInterproscan
IPR029045
all species →
Homologous_superfamilyClpP/crotonase-like domain superfamilyInterproscan
IPR036291
all species →
Homologous_superfamilyNAD(P)-binding domain superfamilyInterproscan
IPR006180
all species →
Conserved_site3-hydroxyacyl-CoA dehydrogenase, conserved siteInterproscan
IPR001753
all species →
FamilyEnoyl-CoA hydratase/isomeraseInterproscan
IPR050136
all species →
FamilyFatty acid oxidation complex subunit alphaInterproscan
IPR006176
all species →
Domain3-hydroxyacyl-CoA dehydrogenase, NAD bindingInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43612
all species →
TRIFUNCTIONAL ENZYME SUBUNIT ALPHAInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006631
all species →
Biological Processfatty acid metabolic processInterproscan
GO:0016491
all species →
Molecular Functionoxidoreductase activityInterproscan
GO:0016616
all species →
Molecular Functionoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptorInterproscan
GO:0070403
all species →
Molecular FunctionNAD+ bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Contig132.15.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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