Detailed information of evm.model.Contig132.204 in Hemicorallium imperiale

Genomic Location: Contig132:479784...481160
NR annotation: TVR63079.1, class II fumarate hydratase [Spirochaetaceae bacterium]
Species abbreviation HIMPE · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Contig132.204 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9I587Fumarate hydratase class II 1 OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=fumC1 PE=3 SV=1
Q88M20Fumarate hydratase class II OS=Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440) OX=160488 GN=fumC PE=3 SV=1
Q1RHL6Fumarate hydratase class II OS=Rickettsia bellii (strain RML369-C) OX=336407 GN=fumC PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003360 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00206
all species →		Lyase_1LyaseDomainInterproscan
PF10415
all species →		FumaraseC_CFumarase C C-terminusDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR022761
all species →		DomainFumarate lyase, N-terminalInterproscan
IPR051546
all species →		FamilyClass-II Aspartate Ammonia-LyaseInterproscan
IPR024083
all species →		Homologous_superfamilyFumarase/histidase, N-terminalInterproscan
IPR008948
all species →		Homologous_superfamilyL-Aspartase-likeInterproscan
IPR020557
all species →		Conserved_siteFumarate lyase, conserved siteInterproscan
IPR018951
all species →		DomainFumarase C, C-terminalInterproscan
IPR000362
all species →		FamilyFumarate lyase familyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR42696
all species →		ASPARTATE AMMONIA-LYASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005829
all species →		Cellular ComponentcytosolInterproscan
GO:0006531
all species →		Biological Processaspartate metabolic processInterproscan
GO:0008797
all species →		Molecular Functionaspartate ammonia-lyase activityInterproscan
GO:0003824
all species →		Molecular Functioncatalytic activityInterproscan
GO:0006099
all species →		Biological Processtricarboxylic acid cycleInterproscan
GO:0016829
all species →		Molecular Functionlyase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K01679E4.2.1.2B, fumC, FH; fumarate hydratase, class IIEC:4.2.1.2
Cushing syndromeko04934deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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