Gene detail

Detailed information of evm.model.Contig132.209 in Hemicorallium imperiale

Genomic Location: Contig132:490571...501114
NR annotation: KAE9631171.1, nitrate reductase [Zongyanglinia marina]
Species abbreviation HIMPE · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

No sequence record for evm.model.Contig132.209 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P00964	Glutamine synthetase OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=glnA PE=1 SV=3
P28605	Glutamine synthetase OS=Picosynechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) OX=32049 GN=glnA PE=3 SV=2
P94126	Glutamine synthetase OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 / LMG 6465 / NBRC 14845 / NCIMB 13405 / ORS 571) OX=438753 GN=glnA PE=3 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0009984 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00120 all species →	Gln-synt_C	Glutamine synthetase, catalytic domain	Domain	Interproscan
PF01425 all species →	Amidase	Amidase	Family	Interproscan
PF03951 all species →	Gln-synt_N	Glutamine synthetase, beta-Grasp domain	Domain	Interproscan
PF02775 all species →	TPP_enzyme_C	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain	Domain	Interproscan
PF02776 all species →	TPP_enzyme_N	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain	Domain	Interproscan
PF02133 all species →	Transp_cyt_pur	Permease for cytosine/purines, uracil, thiamine, allantoin	Family	Interproscan
PF13407 all species →	Peripla_BP_4	Periplasmic binding protein domain	Family	Interproscan
PF00205 all species →	TPP_enzyme_M	Thiamine pyrophosphate enzyme, central domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029035 all species →	Homologous_superfamily	DHS-like NAD/FAD-binding domain superfamily	Interproscan
IPR028082 all species →	Homologous_superfamily	Periplasmic binding protein-like I	Interproscan
IPR008146 all species →	Domain	Glutamine synthetase, catalytic domain	Interproscan
IPR027303 all species →	Conserved_site	Glutamine synthetase, glycine-rich site	Interproscan
IPR014746 all species →	Homologous_superfamily	Glutamine synthetase/guanido kinase, catalytic domain	Interproscan
IPR045229 all species →	Family	Thiamine pyrophosphate enzyme	Interproscan
IPR023631 all species →	Domain	Amidase signature domain	Interproscan
IPR008147 all species →	Domain	Glutamine synthetase, N-terminal domain	Interproscan
IPR000399 all species →	Conserved_site	TPP-binding enzyme, conserved site	Interproscan
IPR036928 all species →	Homologous_superfamily	Amidase signature (AS) superfamily	Interproscan
IPR029061 all species →	Homologous_superfamily	Thiamin diphosphate-binding fold	Interproscan
IPR027302 all species →	Conserved_site	Glutamine synthetase, N-terminal conserved site	Interproscan
IPR011766 all species →	Domain	Thiamine pyrophosphate enzyme, TPP-binding	Interproscan
IPR036651 all species →	Homologous_superfamily	Glutamine synthetase, N-terminal domain superfamily	Interproscan
IPR012001 all species →	Domain	Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain	Interproscan
IPR004809 all species →	Family	Glutamine synthetase type I	Interproscan
IPR001248 all species →	Family	Purine-cytosine permease	Interproscan
IPR025997 all species →	Domain	Periplasmic binding protein	Interproscan
IPR012000 all species →	Domain	Thiamine pyrophosphate enzyme, central domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR18968 all species →	THIAMINE PYROPHOSPHATE ENZYMES	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004356 all species →	Molecular Function	glutamine synthetase activity	Interproscan
GO:0006807 all species →	Biological Process	obsolete nitrogen compound metabolic process	Interproscan
GO:0003824 all species →	Molecular Function	catalytic activity	Interproscan
GO:0003984 all species →	Molecular Function	acetolactate synthase activity	Interproscan
GO:0005948 all species →	Cellular Component	acetolactate synthase complex	Interproscan
GO:0009097 all species →	Biological Process	isoleucine biosynthetic process	Interproscan
GO:0009099 all species →	Biological Process	L-valine biosynthetic process	Interproscan
GO:0050660 all species →	Molecular Function	flavin adenine dinucleotide binding	Interproscan
GO:0006542 all species →	Biological Process	glutamine biosynthetic process	Interproscan
GO:0000287 all species →	Molecular Function	magnesium ion binding	Interproscan
GO:0030976 all species →	Molecular Function	thiamine pyrophosphate binding	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0022857 all species →	Molecular Function	transmembrane transporter activity	Interproscan
GO:0055085 all species →	Biological Process	transmembrane transport	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for evm.model.Contig132.209.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.