Gene detail

Detailed information of evm.model.Contig132.212 in Hemicorallium imperiale

Genomic Location: Contig132:504875...505951
NR annotation: OPZ61371.1, Phosphoserine aminotransferase [Synergistetes bacterium ADurb.Bin520]
Species Hemicorallium imperiale · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

No sequence record for evm.model.Contig132.212 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
B1HSU6	Phosphoserine aminotransferase OS=Lysinibacillus sphaericus (strain C3-41) OX=444177 GN=serC PE=3 SV=1
Q59196	Phosphoserine aminotransferase OS=Niallia circulans OX=1397 GN=serC PE=1 SV=3
C1D8N3	Phosphoserine aminotransferase OS=Laribacter hongkongensis (strain HLHK9) OX=557598 GN=serC PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004752 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00266 all species →	Aminotran_5	Aminotransferase class-V	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR022278 all species →	Family	Phosphoserine aminotransferase	Interproscan
IPR015421 all species →	Homologous_superfamily	Pyridoxal phosphate-dependent transferase, major domain	Interproscan
IPR015422 all species →	Homologous_superfamily	Pyridoxal phosphate-dependent transferase, small domain	Interproscan
IPR015424 all species →	Homologous_superfamily	Pyridoxal phosphate-dependent transferase	Interproscan
IPR000192 all species →	Domain	Aminotransferase class V domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43247 all species →	PHOSPHOSERINE AMINOTRANSFERASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004648 all species →	Molecular Function	O-phospho-L-serine:2-oxoglutarate aminotransferase activity	Interproscan
GO:0006564 all species →	Biological Process	L-serine biosynthetic process	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0030170 all species →	Molecular Function	pyridoxal phosphate binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00831	serC, PSAT1; phosphoserine aminotransferase	EC:2.6.1.52	Amino acid related enzymes	ko01007	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.