Detailed information of evm.model.Contig132.274 in Hemicorallium imperiale

Genomic Location: Contig132:650457...651893
NR annotation: WP_054342929.1, BCCT family transporter [Neptunomonas antarctica]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Contig132.274 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q87J97Glycine betaine transporter 2 OS=Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633) OX=223926 GN=VPA0356 PE=1 SV=1
Q9X4A5Glycine betaine transporter BetL OS=Listeria monocytogenes OX=1639 GN=betL PE=1 SV=1
Q24SP9Probable glycine betaine transporter OS=Desulfitobacterium hafniense (strain Y51) OX=138119 GN=DSY3154 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000591 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02028
all species →		BCCTBCCT, betaine/carnitine/choline family transporterFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000060
all species →		FamilyBCCT transporter familyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR30047
all species →		HIGH-AFFINITY CHOLINE TRANSPORT PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016020
all species →		Cellular ComponentmembraneInterproscan
GO:0022857
all species →		Molecular Functiontransmembrane transporter activityInterproscan
GO:0071705
all species →		Biological Processnitrogen compound transportInterproscan
GO:0005886
all species →		Cellular Componentplasma membraneInterproscan
GO:0006810
all species →		Biological ProcesstransportInterproscan
GO:0016021
all species →		Cellular ComponentmembraneInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K05020opuD, betL; glycine betaine transporter-Transportersko02000deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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