Detailed information of evm.model.Contig132.292 in Hemicorallium imperiale

Genomic Location: Contig132:690014...694824
NR annotation: WP_028973078.1, ATP-binding cassette domain-containing protein [Spirochaeta cellobiosiphila]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Contig132.292 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
O31716Uncharacterized ABC transporter ATP-binding protein YkpA OS=Bacillus subtilis (strain 168) OX=224308 GN=ykpA PE=3 SV=1
P0A9U5Probable ATP-binding protein YbiT OS=Escherichia coli O157:H7 OX=83334 GN=ybiT PE=3 SV=1
P0A9U4Probable ATP-binding protein YbiT OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) OX=199310 GN=ybiT PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0012805 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12848
all species →		ABC_tran_XtnABC transporterDomainInterproscan
PF00005
all species →		ABC_tranABC transporterDomainInterproscan
PF02687
all species →		FtsXFtsX-like permease familyFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003593
all species →		DomainAAA+ ATPase domainInterproscan
IPR051309
all species →		FamilyABC transporter ABCF subfamily ATPaseInterproscan
IPR027417
all species →		Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR003439
all species →		DomainABC transporter-like, ATP-binding domainInterproscan
IPR032781
all species →		DomainABC-transporter extension domainInterproscan
IPR003838
all species →		DomainABC3 transporter permease protein domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR42855
all species →		ABC TRANSPORTER ATP-BINDING SUBUNITInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016887
all species →		Molecular FunctionATP hydrolysis activityInterproscan
GO:0005524
all species →		Molecular FunctionATP bindingInterproscan
GO:0016020
all species →		Cellular ComponentmembraneInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Contig132.292.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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