Genomic Location: Contig132:110890...116717
NR annotation: WP_014455932.1, carbamoyl-phosphate synthase large subunit [Spirochaeta africana]
Species Hemicorallium imperiale · all data for this species · gene families
evm.model.Contig132.44 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| O28994 | Carbamoyl phosphate synthase large chain OS=Archaeoglobus fulgidus (strain ATCC 49558 / DSM 4304 / JCM 9628 / NBRC 100126 / VC-16) OX=224325 GN=carB PE=3 SV=1 |
| Q7VP67 | Carbamoyl phosphate synthase large chain OS=Haemophilus ducreyi (strain 35000HP / ATCC 700724) OX=233412 GN=carB PE=3 SV=1 |
| C1A4I5 | Carbamoyl phosphate synthase large chain OS=Gemmatimonas aurantiaca (strain DSM 14586 / JCM 11422 / NBRC 100505 / T-27) OX=379066 GN=carB PE=3 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0001107 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF02787 all species → | CPSase_L_D3 | Carbamoyl-phosphate synthetase large chain, oligomerisation domain | Domain | Interproscan |
| PF12796 all species → | Ank_2 | Ankyrin repeats (3 copies) | Repeat | Interproscan |
| PF00117 all species → | GATase | Glutamine amidotransferase class-I | Domain | Interproscan |
| PF02142 all species → | MGS | MGS-like domain | Domain | Interproscan |
| PF02786 all species → | CPSase_L_D2 | Carbamoyl-phosphate synthase L chain, ATP binding domain | Domain | Interproscan |
| PF00988 all species → | CPSase_sm_chain | Carbamoyl-phosphate synthase small chain, CPSase domain | Domain | Interproscan |
| PF13857 all species → | Ank_5 | Ankyrin repeats (many copies) | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR029062 all species → | Homologous_superfamily | Class I glutamine amidotransferase-like | Interproscan |
| IPR036897 all species → | Homologous_superfamily | Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily | Interproscan |
| IPR005480 all species → | Domain | Carbamoyl-phosphate synthetase, large subunit oligomerisation domain | Interproscan |
| IPR036770 all species → | Homologous_superfamily | Ankyrin repeat-containing domain superfamily | Interproscan |
| IPR013815 all species → | Homologous_superfamily | ATP-grasp fold, subdomain 1 | Interproscan |
| IPR036914 all species → | Homologous_superfamily | Methylglyoxal synthase-like domain superfamily | Interproscan |
| IPR002110 all species → | Repeat | Ankyrin repeat | Interproscan |
| IPR017926 all species → | Domain | Glutamine amidotransferase | Interproscan |
| IPR036480 all species → | Homologous_superfamily | Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily | Interproscan |
| IPR005479 all species → | Domain | Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain | Interproscan |
| IPR011607 all species → | Domain | Methylglyoxal synthase-like domain | Interproscan |
| IPR011761 all species → | Domain | ATP-grasp fold | Interproscan |
| IPR016185 all species → | Homologous_superfamily | Pre-ATP-grasp domain superfamily | Interproscan |
| IPR002474 all species → | Domain | Carbamoyl-phosphate synthase small subunit, N-terminal domain | Interproscan |
| IPR033937 all species → | Domain | Carbamoyl-phosphate synthase large chain, methylglyoxal synthase-like domain | Interproscan |
| IPR005483 all species → | Domain | Carbamoyl-phosphate synthase large subunit, CPSase domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11405 all species → | CARBAMOYLTRANSFERASE FAMILY MEMBER | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005524 all species → | Molecular Function | ATP binding | Interproscan |
| GO:0005515 all species → | Molecular Function | protein binding | Interproscan |
| GO:0046872 all species → | Molecular Function | metal ion binding | Interproscan |
| GO:0004088 all species → | Molecular Function | carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity | Interproscan |
| GO:0005737 all species → | Cellular Component | cytoplasm | Interproscan |
| GO:0005951 all species → | Cellular Component | carbamoyl-phosphate synthase complex | Interproscan |
| GO:0006526 all species → | Biological Process | L-arginine biosynthetic process | Interproscan |
| GO:0006807 all species → | Biological Process | obsolete nitrogen compound metabolic process | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K01955 | carB, CPA2; carbamoyl-phosphate synthase large subunit | EC:6.3.5.5 | Alanine, aspartate and glutamate metabolism | ko00250 | deepkoala |
