Gene detail

Detailed information of evm.model.Contig132.44 in Hemicorallium imperiale

Genomic Location: Contig132:110890...116717
NR annotation: WP_014455932.1, carbamoyl-phosphate synthase large subunit [Spirochaeta africana]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
O28994	Carbamoyl phosphate synthase large chain OS=Archaeoglobus fulgidus (strain ATCC 49558 / DSM 4304 / JCM 9628 / NBRC 100126 / VC-16) OX=224325 GN=carB PE=3 SV=1
Q7VP67	Carbamoyl phosphate synthase large chain OS=Haemophilus ducreyi (strain 35000HP / ATCC 700724) OX=233412 GN=carB PE=3 SV=1
C1A4I5	Carbamoyl phosphate synthase large chain OS=Gemmatimonas aurantiaca (strain DSM 14586 / JCM 11422 / NBRC 100505 / T-27) OX=379066 GN=carB PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02787	CPSase_L_D3	Carbamoyl-phosphate synthetase large chain, oligomerisation domain	Domain	Interproscan
PF12796	Ank_2	Ankyrin repeats (3 copies)	Repeat	Interproscan
PF00117	GATase	Glutamine amidotransferase class-I	Domain	Interproscan
PF02142	MGS	MGS-like domain	Domain	Interproscan
PF02786	CPSase_L_D2	Carbamoyl-phosphate synthase L chain, ATP binding domain	Domain	Interproscan
PF00988	CPSase_sm_chain	Carbamoyl-phosphate synthase small chain, CPSase domain	Domain	Interproscan
PF13857	Ank_5	Ankyrin repeats (many copies)	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029062	Homologous_superfamily	Class I glutamine amidotransferase-like	Interproscan
IPR036897	Homologous_superfamily	Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily	Interproscan
IPR005480	Domain	Carbamoyl-phosphate synthetase, large subunit oligomerisation domain	Interproscan
IPR036770	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan
IPR013815	Homologous_superfamily	ATP-grasp fold, subdomain 1	Interproscan
IPR036914	Homologous_superfamily	Methylglyoxal synthase-like domain superfamily	Interproscan
IPR002110	Repeat	Ankyrin repeat	Interproscan
IPR017926	Domain	Glutamine amidotransferase	Interproscan
IPR036480	Homologous_superfamily	Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily	Interproscan
IPR005479	Domain	Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain	Interproscan
IPR011607	Domain	Methylglyoxal synthase-like domain	Interproscan
IPR011761	Domain	ATP-grasp fold	Interproscan
IPR016185	Homologous_superfamily	Pre-ATP-grasp domain superfamily	Interproscan
IPR002474	Domain	Carbamoyl-phosphate synthase small subunit, N-terminal domain	Interproscan
IPR033937	Domain	Carbamoyl-phosphate synthase large chain, methylglyoxal synthase-like domain	Interproscan
IPR005483	Domain	Carbamoyl-phosphate synthase large subunit, CPSase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11405	CARBAMOYLTRANSFERASE FAMILY MEMBER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0046872	Molecular Function	metal ion binding	Interproscan
GO:0004088	Molecular Function	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0005951	Cellular Component	carbamoyl-phosphate synthase complex	Interproscan
GO:0006526	Biological Process	L-arginine biosynthetic process	Interproscan
GO:0006807	Biological Process	obsolete nitrogen compound metabolic process	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K01955	carB, CPA2; carbamoyl-phosphate synthase large subunit	EC:6.3.5.5	Alanine, aspartate and glutamate metabolism	ko00250	deepkoala