Detailed information of evm.model.Contig132.496 in Hemicorallium imperiale

Genomic Location: Contig132:1153768...1157100
NR annotation: MCS6325650.1, phenylalanine--tRNA ligase subunit beta [Nitrospira sp.]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
B2S0L6Phenylalanine--tRNA ligase beta subunit OS=Borrelia hermsii (strain HS1 / DAH) OX=314723 GN=pheT PE=3 SV=1
A1QZU9Phenylalanine--tRNA ligase beta subunit OS=Borrelia turicatae (strain 91E135) OX=314724 GN=pheT PE=3 SV=1
B7J278Phenylalanine--tRNA ligase beta subunit OS=Borreliella burgdorferi (strain ZS7) OX=445985 GN=pheT PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01409tRNA-synt_2dtRNA synthetases class II core domain (F)DomainInterproscan
PF03484B5tRNA synthetase B5 domainDomainInterproscan
PF17759tRNA_synthFbetaPhenylalanyl tRNA synthetase beta chain CLM domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR045060FamilyPhenylalanine-tRNA ligase, class IIc, beta subunitInterproscan
IPR005147DomaintRNA synthetase, B5-domainInterproscan
IPR045864Homologous_superfamilyClass II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)Interproscan
IPR020825Homologous_superfamilyPhenylalanyl-tRNA synthetase-like, B3/B4Interproscan
IPR009061Homologous_superfamilyPutative DNA-binding domain superfamilyInterproscan
IPR002319DomainPhenylalanyl-tRNA synthetaseInterproscan
IPR006195DomainAminoacyl-tRNA synthetase, class IIInterproscan
IPR004531FamilyPhenylalanyl-tRNA synthetase, class IIc, beta subunit, archaeal/eukaryotic typeInterproscan
IPR005146DomainB3/B4 tRNA-binding domainInterproscan
IPR041616DomainPhenylalanyl tRNA synthetase beta chain, core domainInterproscan
IPR004529FamilyPhenylalanyl-tRNA synthetase, class IIc, alpha subunitInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10947PHENYLALANYL-TRNA SYNTHETASE BETA CHAIN AND LEUCINE-RICH REPEAT-CONTAINING PROTEIN 47Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004826Molecular Functionphenylalanine-tRNA ligase activityInterproscan
GO:0006432Biological Processphenylalanyl-tRNA aminoacylationInterproscan
GO:0009328Cellular Componentphenylalanine-tRNA ligase complexInterproscan
GO:0000287Molecular Functionmagnesium ion bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0000049Molecular FunctiontRNA bindingInterproscan
GO:0004812Molecular Functionaminoacyl-tRNA ligase activityInterproscan
GO:0043039Biological ProcesstRNA aminoacylationInterproscan
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K01890FARSB, pheT; phenylalanyl-tRNA synthetase beta chainEC:6.1.1.20
Transfer RNA biogenesisko03016deepkoala

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