Gene detail

Detailed information of evm.model.Contig132.534 in Hemicorallium imperiale

Genomic Location: Contig132:1234804...1235592
NR annotation: MBN2510734.1, aspartate aminotransferase family protein [Spirochaetales bacterium]
Species Hemicorallium imperiale · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

No sequence record for evm.model.Contig132.534 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9JTX9	Acetylornithine aminotransferase OS=Neisseria meningitidis serogroup A / serotype 4A (strain DSM 15465 / Z2491) OX=122587 GN=argD PE=3 SV=1
Q55DT8	Probable acetylornithine aminotransferase, mitochondrial OS=Dictyostelium discoideum OX=44689 GN=argD PE=3 SV=1
Q9JYY4	Acetylornithine aminotransferase OS=Neisseria meningitidis serogroup B (strain ATCC BAA-335 / MC58) OX=122586 GN=argD PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003479 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00202 all species →	Aminotran_3	Aminotransferase class-III	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005814 all species →	Family	Aminotransferase class-III	Interproscan
IPR015421 all species →	Homologous_superfamily	Pyridoxal phosphate-dependent transferase, major domain	Interproscan
IPR015424 all species →	Homologous_superfamily	Pyridoxal phosphate-dependent transferase	Interproscan
IPR015422 all species →	Homologous_superfamily	Pyridoxal phosphate-dependent transferase, small domain	Interproscan
IPR050103 all species →	Family	Class-III Pyridoxal-phosphate-dependent Aminotransferase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11986 all species →	AMINOTRANSFERASE CLASS III	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0008483 all species →	Molecular Function	transaminase activity	Interproscan
GO:0030170 all species →	Molecular Function	pyridoxal phosphate binding	Interproscan
GO:0042802 all species →	Molecular Function	identical protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for evm.model.Contig132.534.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.