Gene detail

Detailed information of evm.model.Contig133.127 in Hemicorallium imperiale

Genomic Location: Contig133:274672...275313
NR annotation: MCF7928965.1, peptide-methionine (R)-S-oxide reductase MsrB [Spirochaetales bacterium]
Species Hemicorallium imperiale · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

No sequence record for evm.model.Contig133.127 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q3SJU1	Peptide methionine sulfoxide reductase MsrB OS=Thiobacillus denitrificans (strain ATCC 25259 / T1) OX=292415 GN=msrB PE=3 SV=1
Q88W33	Peptide methionine sulfoxide reductase MsrB OS=Lactiplantibacillus plantarum (strain ATCC BAA-793 / NCIMB 8826 / WCFS1) OX=220668 GN=msrB PE=3 SV=1
Q1WVT3	Peptide methionine sulfoxide reductase MsrB OS=Ligilactobacillus salivarius (strain UCC118) OX=362948 GN=msrB PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001881 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01641 all species →	SelR	SelR domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011057 all species →	Homologous_superfamily	Mss4-like superfamily	Interproscan
IPR028427 all species →	Family	Peptide methionine sulfoxide reductase MsrB	Interproscan
IPR002579 all species →	Domain	Peptide methionine sulphoxide reductase MrsB domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10173 all species →	METHIONINE SULFOXIDE REDUCTASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0006979 all species →	Biological Process	response to oxidative stress	Interproscan
GO:0016671 all species →	Molecular Function	oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	Interproscan
GO:0030091 all species →	Biological Process	protein repair	Interproscan
GO:0033743 all species →	Molecular Function	peptide-methionine (R)-S-oxide reductase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for evm.model.Contig133.127.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.