Detailed information of evm.model.Contig133.142 in Hemicorallium imperiale

Genomic Location: Contig133:299598...302396
NR annotation: WP_188257784.1, aminomethyl-transferring glycine dehydrogenase [Pseudaminobacter soli]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q98LT6Glycine dehydrogenase (decarboxylating) OS=Mesorhizobium japonicum (strain LMG 29417 / CECT 9101 / MAFF 303099) OX=266835 GN=gcvP PE=3 SV=1
A9WZ23Glycine dehydrogenase (decarboxylating) OS=Brucella suis (strain ATCC 23445 / NCTC 10510) OX=470137 GN=gcvP PE=3 SV=1
C0RLN1Glycine dehydrogenase (decarboxylating) OS=Brucella melitensis biotype 2 (strain ATCC 23457) OX=546272 GN=gcvP PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02347GDC-PGlycine cleavage system P-proteinDomainInterproscan
PF21478GcvP2_CGlycine dehydrogenase, C-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR020581FamilyGlycine cleavage system P proteinInterproscan
IPR049315DomainGlycine cleavage system P-protein, N-terminal domainInterproscan
IPR015424Homologous_superfamilyPyridoxal phosphate-dependent transferaseInterproscan
IPR015421Homologous_superfamilyPyridoxal phosphate-dependent transferase, major domainInterproscan
IPR049316DomainGlycine dehydrogenase, C-terminal domainInterproscan
IPR003437FamilyGlycine dehydrogenase (decarboxylating)Interproscan
IPR015422Homologous_superfamilyPyridoxal phosphate-dependent transferase, small domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11773GLYCINE DEHYDROGENASE, DECARBOXYLATINGInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004375Molecular Functionglycine dehydrogenase (decarboxylating) activityInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0005960Cellular Componentglycine cleavage complexInterproscan
GO:0006546Biological Processglycine catabolic processInterproscan
GO:0016594Molecular Functionglycine bindingInterproscan
GO:0019464Biological Processglycine decarboxylation via glycine cleavage systemInterproscan
GO:0030170Molecular Functionpyridoxal phosphate bindingInterproscan
GO:0006544Biological Processglycine metabolic processInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K00281GLDC, gcvP; glycine cleavage system P protein (glycine dehydrogenase)EC:1.4.4.2
Lipoic acid metabolismko00785deepkoala

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