Detailed information of evm.model.Contig133.152 in Hemicorallium imperiale

Genomic Location: Contig133:323991...325220
NR annotation: OJX09529.1, tRNA guanosine(34) transglycosylase Tgt [Caedibacter sp. 37-49]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Contig133.152 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A5USV3Queuine tRNA-ribosyltransferase OS=Roseiflexus sp. (strain RS-1) OX=357808 GN=tgt PE=3 SV=1
Q6MD31Queuine tRNA-ribosyltransferase OS=Protochlamydia amoebophila (strain UWE25) OX=264201 GN=tgt PE=3 SV=1
B8CXG0Queuine tRNA-ribosyltransferase OS=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) OX=373903 GN=tgt PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003392 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01702
all species →		TGTQueuine tRNA-ribosyltransferaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050076
all species →		FamilyArchaeosine Synthase Type 1/Queuine TRNA-RibosyltransferaseInterproscan
IPR004803
all species →		FamilytRNA-guanine transglycosylaseInterproscan
IPR036511
all species →		Homologous_superfamilyQueuine tRNA-ribosyltransferase-likeInterproscan
IPR002616
all species →		DomaintRNA-guanine(15) transglycosylase-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46499
all species →		QUEUINE TRNA-RIBOSYLTRANSFERASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0002099
all species →		Biological ProcesstRNA wobble guanine modificationInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0008616
all species →		Biological Processqueuosine biosynthetic processInterproscan
GO:0008479
all species →		Molecular FunctiontRNA-guanosine(34) queuine transglycosylase activityInterproscan
GO:0101030
all species →		Biological ProcesstRNA-guanine transglycosylationInterproscan
GO:0006400
all species →		Biological ProcesstRNA modificationInterproscan
GO:0016763
all species →		Molecular Functionpentosyltransferase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K00773tgt; queuine tRNA-ribosyltransferaseEC:2.4.2.29
Transfer RNA biogenesisko03016deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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