Detailed information of evm.model.Contig133.168 in Hemicorallium imperiale

Genomic Location: Contig133:361062...362252
NR annotation: MCE1255144.1, ornithine--oxo-acid transaminase [Anaerolineae bacterium]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Contig133.168 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q89RB7Ornithine aminotransferase OS=Bradyrhizobium diazoefficiens (strain JCM 10833 / BCRC 13528 / IAM 13628 / NBRC 14792 / USDA 110) OX=224911 GN=rocD PE=3 SV=1
Q7WP51Ornithine aminotransferase OS=Bordetella bronchiseptica (strain ATCC BAA-588 / NCTC 13252 / RB50) OX=257310 GN=rocD PE=3 SV=2
Q7W1E4Ornithine aminotransferase OS=Bordetella parapertussis (strain 12822 / ATCC BAA-587 / NCTC 13253) OX=257311 GN=rocD PE=3 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003479 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00202
all species →		Aminotran_3Aminotransferase class-IIIDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR005814
all species →		FamilyAminotransferase class-IIIInterproscan
IPR015421
all species →		Homologous_superfamilyPyridoxal phosphate-dependent transferase, major domainInterproscan
IPR015422
all species →		Homologous_superfamilyPyridoxal phosphate-dependent transferase, small domainInterproscan
IPR050103
all species →		FamilyClass-III Pyridoxal-phosphate-dependent AminotransferaseInterproscan
IPR010164
all species →		FamilyOrnithine aminotransferaseInterproscan
IPR015424
all species →		Homologous_superfamilyPyridoxal phosphate-dependent transferaseInterproscan
IPR049704
all species →		Conserved_siteAminotransferases class-III pyridoxal-phosphate attachment siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11986
all species →		AMINOTRANSFERASE CLASS IIIInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0008483
all species →		Molecular Functiontransaminase activityInterproscan
GO:0030170
all species →		Molecular Functionpyridoxal phosphate bindingInterproscan
GO:0042802
all species →		Molecular Functionidentical protein bindingInterproscan
GO:0004587
all species →		Molecular Functionornithine aminotransferase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K00819rocD, OAT; ornithine--oxo-acid transaminaseEC:2.6.1.13
Amino acid related enzymesko01007deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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