Detailed information of evm.model.Contig133.173 in Hemicorallium imperiale

Genomic Location: Contig133:368950...370017
NR annotation: RKX93798.1, peptide chain release factor 1 [Spirochaetota bacterium]
Species abbreviation HIMPE · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Contig133.173 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
C6BYQ4Peptide chain release factor 1 OS=Maridesulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIMB 8403 / VKM B-1763) OX=526222 GN=prfA PE=3 SV=1
Q73JU6Peptide chain release factor 1 OS=Treponema denticola (strain ATCC 35405 / DSM 14222 / CIP 103919 / JCM 8153 / KCTC 15104) OX=243275 GN=prfA PE=3 SV=1
C4XIQ1Peptide chain release factor 1 OS=Solidesulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) OX=573370 GN=prfA PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002637 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00472
all species →		RF-1RF-1 domainFamilyInterproscan
PF03462
all species →		PCRFPCRF domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR004373
all species →		FamilyPeptide chain release factor 1Interproscan
IPR000352
all species →		DomainPeptide chain release factor class IInterproscan
IPR005139
all species →		DomainPeptide chain release factorInterproscan
IPR050057
all species →		FamilyProkaryotic/Mitochondrial Release FactorInterproscan
IPR045853
all species →		Homologous_superfamilyPeptide chain release factor class I superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43804
all species →		LD18447PInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006415
all species →		Biological Processtranslational terminationInterproscan
GO:0016149
all species →		Molecular Functiontranslation release factor activity, codon specificInterproscan
GO:0003747
all species →		Molecular Functiontranslation release factor activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K02835prfA, MTRF1, MRF1; peptide chain release factor 1-Translation factorsko03012deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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