Detailed information of evm.model.Contig133.232 in Hemicorallium imperiale

Genomic Location: Contig133:492875...494308
NR annotation: WP_014455926.1, glutamate synthase subunit beta [Spirochaeta africana]
Species abbreviation HIMPE · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Contig133.232 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q03460Glutamate synthase [NADH], amyloplastic OS=Medicago sativa OX=3879 PE=1 SV=1
Q0JKD0Glutamate synthase 1 [NADH], chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0681900 PE=2 SV=1
Q9LV03Glutamate synthase 1 [NADH], chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GLT1 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002031 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF14691
all species →		Fer4_20Dihydroprymidine dehydrogenase domain II, 4Fe-4S clusterDomainInterproscan
PF07992
all species →		Pyr_redox_2Pyridine nucleotide-disulphide oxidoreductaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR028261
all species →		DomainDihydroprymidine dehydrogenase domain IIInterproscan
IPR009051
all species →		Homologous_superfamilyAlpha-helical ferredoxinInterproscan
IPR023753
all species →		DomainFAD/NAD(P)-binding domainInterproscan
IPR036188
all species →		Homologous_superfamilyFAD/NAD(P)-binding domain superfamilyInterproscan
IPR051394
all species →		FamilyGlutamate SynthaseInterproscan
IPR006005
all species →		FamilyGlutamate synthase, NADH/NADPH, small subunit 1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43100
all species →		GLUTAMATE SYNTHASE [NADPH] SMALL CHAINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0051536
all species →		Molecular Functioniron-sulfur cluster bindingInterproscan
GO:0016491
all species →		Molecular Functionoxidoreductase activityInterproscan
GO:0006537
all species →		Biological Processglutamate biosynthetic processInterproscan
GO:0016639
all species →		Molecular Functionoxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptorInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K00266gltD; glutamate synthase (NADPH) small chainEC:1.4.1.13
Alanine, aspartate and glutamate metabolismko00250deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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