Detailed information of evm.model.Contig133.245 in Hemicorallium imperiale

Genomic Location: Contig133:525282...526688
NR annotation: MBE7480513.1, NADP-dependent phosphogluconate dehydrogenase [Polyangiaceae bacterium]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Contig133.245 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P377566-phosphogluconate dehydrogenase, decarboxylating OS=Shigella flexneri OX=623 GN=gnd PE=3 SV=1
P003506-phosphogluconate dehydrogenase, decarboxylating OS=Escherichia coli (strain K12) OX=83333 GN=gnd PE=1 SV=2
Q9CHU66-phosphogluconate dehydrogenase, decarboxylating OS=Lactococcus lactis subsp. lactis (strain IL1403) OX=272623 GN=gnd PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004720 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03446
all species →		NAD_binding_2NAD binding domain of 6-phosphogluconate dehydrogenaseDomainInterproscan
PF00393
all species →		6PGD6-phosphogluconate dehydrogenase, C-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR008927
all species →		Homologous_superfamily6-phosphogluconate dehydrogenase-like, C-terminal domain superfamilyInterproscan
IPR006114
all species →		Domain6-phosphogluconate dehydrogenase, C-terminalInterproscan
IPR006115
all species →		Domain6-phosphogluconate dehydrogenase, NADP-bindingInterproscan
IPR006183
all species →		Family6-phosphogluconate dehydrogenaseInterproscan
IPR036291
all species →		Homologous_superfamilyNAD(P)-binding domain superfamilyInterproscan
IPR006113
all species →		Family6-phosphogluconate dehydrogenase, decarboxylatingInterproscan
IPR013328
all species →		Homologous_superfamily6-phosphogluconate dehydrogenase, domain 2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11811
all species →		6-PHOSPHOGLUCONATE DEHYDROGENASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004616
all species →		Molecular Functionphosphogluconate dehydrogenase (decarboxylating) activityInterproscan
GO:0006098
all species →		Biological Processpentose-phosphate shuntInterproscan
GO:0050661
all species →		Molecular FunctionNADP bindingInterproscan
GO:0005829
all species →		Cellular ComponentcytosolInterproscan
GO:0009051
all species →		Biological Processpentose-phosphate shunt, oxidative branchInterproscan
GO:0046177
all species →		Biological ProcessD-gluconate catabolic processInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K00033PGD, gnd, gntZ; 6-phosphogluconate dehydrogenaseEC:1.1.1.44
EC:1.1.1.343
Glutathione metabolismko00480deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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