Detailed information of evm.model.Contig133.246 in Hemicorallium imperiale

Genomic Location: Contig133:527146...528828
NR annotation: HHV59877.1, glutamine--tRNA ligase/YqeY domain fusion protein [Clostridiaceae bacterium]
Species abbreviation HIMPE · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Contig133.246 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A5N6Y3Glutamine--tRNA ligase OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NBRC 12016 / NCIMB 10680 / K1) OX=431943 GN=glnS PE=3 SV=1
Q8XMP3Glutamine--tRNA ligase OS=Clostridium perfringens (strain 13 / Type A) OX=195102 GN=glnS PE=3 SV=1
Q0TTG1Glutamine--tRNA ligase OS=Clostridium perfringens (strain ATCC 13124 / DSM 756 / JCM 1290 / NCIMB 6125 / NCTC 8237 / Type A) OX=195103 GN=glnS PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002736 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03950
all species →		tRNA-synt_1c_CtRNA synthetases class I (E and Q), anti-codon binding domainDomainInterproscan
PF20974
all species →		tRNA-synt_1c_C2tRNA synthetases class I (E and Q), anti-codon binding domainDomainInterproscan
PF00749
all species →		tRNA-synt_1ctRNA synthetases class I (E and Q), catalytic domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR004514
all species →		FamilyGlutamine-tRNA synthetaseInterproscan
IPR020056
all species →		Homologous_superfamilyLarge ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminalInterproscan
IPR000924
all species →		FamilyGlutamyl/glutaminyl-tRNA synthetaseInterproscan
IPR020059
all species →		DomainGlutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domainInterproscan
IPR001412
all species →		Conserved_siteAminoacyl-tRNA synthetase, class I, conserved siteInterproscan
IPR011035
all species →		Homologous_superfamilyLarge ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamilyInterproscan
IPR020061
all species →		Homologous_superfamilyGlutamine-tRNA ligase, alpha-bundle domain superfamilyInterproscan
IPR049437
all species →		DomaintRNA synthetases class I (E and Q), anti-codon binding domainInterproscan
IPR014729
all species →		Homologous_superfamilyRossmann-like alpha/beta/alpha sandwich foldInterproscan
IPR050132
all species →		FamilyGlutamine/Glutamate--tRNA LigaseInterproscan
IPR020058
all species →		DomainGlutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43097
all species →		GLUTAMINE-TRNA LIGASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000166
all species →		Molecular Functionnucleotide bindingInterproscan
GO:0004819
all species →		Molecular Functionglutamine-tRNA ligase activityInterproscan
GO:0005524
all species →		Molecular FunctionATP bindingInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0006425
all species →		Biological Processglutaminyl-tRNA aminoacylationInterproscan
GO:0004812
all species →		Molecular Functionaminoacyl-tRNA ligase activityInterproscan
GO:0043039
all species →		Biological ProcesstRNA aminoacylationInterproscan
GO:0006418
all species →		Biological ProcesstRNA aminoacylation for protein translationInterproscan
GO:0006412
all species →		Biological ProcesstranslationInterproscan
GO:0005829
all species →		Cellular ComponentcytosolInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K01886QARS, glnS; glutaminyl-tRNA synthetaseEC:6.1.1.18
Transfer RNA biogenesisko03016deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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