Detailed information of evm.model.Contig133.262 in Hemicorallium imperiale

Genomic Location: Contig133:553554...554885
NR annotation: WP_083052545.1, signal recognition particle protein [Marispirochaeta aestuarii]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P37105Signal recognition particle protein OS=Bacillus subtilis (strain 168) OX=224308 GN=ffh PE=1 SV=1
O67615Signal recognition particle protein OS=Aquifex aeolicus (strain VF5) OX=224324 GN=ffh PE=3 SV=1
P0AGD9Signal recognition particle protein OS=Escherichia coli O157:H7 OX=83334 GN=ffh PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02978SRP_SPBSignal peptide binding domainDomainInterproscan
PF02881SRP54_NSRP54-type protein, helical bundle domainDomainInterproscan
PF00448SRP54SRP54-type protein, GTPase domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR003593DomainAAA+ ATPase domainInterproscan
IPR000897DomainSignal recognition particle, SRP54 subunit, GTPase domainInterproscan
IPR004780FamilySignal recognition particle proteinInterproscan
IPR004125DomainSignal recognition particle, SRP54 subunit, M-domainInterproscan
IPR036225Homologous_superfamilySRP/SRP receptor, N-terminalInterproscan
IPR013822DomainSignal recognition particle SRP54, helical bundleInterproscan
IPR036891Homologous_superfamilySignal recognition particle, SRP54 subunit, M-domain superfamilyInterproscan
IPR042101Homologous_superfamilySignal recognition particle SRP54, N-terminal domain superfamilyInterproscan
IPR022941FamilySignal recognition particle, SRP54 subunitInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11564SIGNAL RECOGNITION PARTICLE 54K PROTEIN SRP54Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0005525Molecular FunctionGTP bindingInterproscan
GO:0006614Biological ProcessSRP-dependent cotranslational protein targeting to membraneInterproscan
GO:0003924Molecular FunctionGTPase activityInterproscan
GO:0048500Cellular Componentsignal recognition particleInterproscan
GO:0008312Molecular Function7S RNA bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K03106SRP54, ffh; signal recognition particle subunit SRP54EC:3.6.5.4
Secretion systemko02044deepkoala

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