Detailed information of evm.model.Contig133.380 in Hemicorallium imperiale

Genomic Location: Contig133:821354...821776
NR annotation: MBN2552173.1, 50S ribosomal protein L17 [Spirochaetales bacterium]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Contig133.380 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A1QZT9Large ribosomal subunit protein bL17 OS=Borrelia turicatae (strain 91E135) OX=314724 GN=rplQ PE=3 SV=1
B5RM61Large ribosomal subunit protein bL17 OS=Borrelia duttonii (strain Ly) OX=412419 GN=rplQ PE=3 SV=1
B5RPK7Large ribosomal subunit protein bL17 OS=Borrelia recurrentis (strain A1) OX=412418 GN=rplQ PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004864 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01196
all species →		Ribosomal_L17Ribosomal protein L17FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036373
all species →		Homologous_superfamilyLarge ribosomal subunit protein bL17 superfamilyInterproscan
IPR000456
all species →		FamilyLarge ribosomal subunit protein bL17Interproscan
IPR047859
all species →		Conserved_siteLarge ribosomal subunit protein bL17, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14413
all species →		RIBOSOMAL PROTEIN L17Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003735
all species →		Molecular Functionstructural constituent of ribosomeInterproscan
GO:0005840
all species →		Cellular ComponentribosomeInterproscan
GO:0006412
all species →		Biological ProcesstranslationInterproscan
GO:0015934
all species →		Cellular Componentlarge ribosomal subunitInterproscan
GO:0022625
all species →		Cellular Componentcytosolic large ribosomal subunitInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K02879RP-L17, MRPL17, rplQ; large subunit ribosomal protein L17-Ribosomeko03011deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP