Detailed information of evm.model.Contig133.392 in Hemicorallium imperiale

Genomic Location: Contig133:834151...834906
NR annotation: AHC14294.1, Translation elongation factor Tu [Salinispira pacifica]
Species abbreviation HIMPE · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Contig133.392 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P26184Elongation factor Tu OS=Flexistipes sinusarabici OX=2352 GN=tuf PE=3 SV=1
Q6AP86Elongation factor Tu 1 OS=Desulfotalea psychrophila (strain LSv54 / DSM 12343) OX=177439 GN=tuf1 PE=3 SV=1
A9KD33Elongation factor Tu OS=Coxiella burnetii (strain Dugway 5J108-111) OX=434922 GN=tuf1 PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003939 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03143
all species →
GTP_EFTU_D3Elongation factor Tu C-terminal domainDomainInterproscan
PF03144
all species →
GTP_EFTU_D2Elongation factor Tu domain 2DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR033720
all species →
DomainElongation factor Tu, domain 2Interproscan
IPR004160
all species →
DomainTranslation elongation factor EFTu/EF1A, C-terminalInterproscan
IPR009000
all species →
Homologous_superfamilyTranslation protein, beta-barrel domain superfamilyInterproscan
IPR050055
all species →
FamilyElongation factor Tu GTPaseInterproscan
IPR027417
all species →
Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR004161
all species →
DomainTranslation elongation factor EFTu-like, domain 2Interproscan
IPR009001
all species →
Homologous_superfamilyTranslation elongation factor EF1A/initiation factor IF2gamma, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43721
all species →
ELONGATION FACTOR TU-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003746
all species →
Molecular Functiontranslation elongation factor activityInterproscan
GO:0005829
all species →
Cellular ComponentcytosolInterproscan
GO:0006414
all species →
Biological Processtranslational elongationInterproscan
GO:0005525
all species →
Molecular FunctionGTP bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Contig133.392.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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