Detailed information of evm.model.Contig133.393 in Hemicorallium imperiale

Genomic Location: Contig133:835589...836056
NR annotation: TVQ24955.1, 30S ribosomal protein S7 [Spirochaetaceae bacterium]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Contig133.393 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
O51347Small ribosomal subunit protein uS7 OS=Borreliella burgdorferi (strain ATCC 35210 / DSM 4680 / CIP 102532 / B31) OX=224326 GN=rpsG PE=1 SV=1
B7J1V8Small ribosomal subunit protein uS7 OS=Borreliella burgdorferi (strain ZS7) OX=445985 GN=rpsG PE=3 SV=1
Q661N2Small ribosomal subunit protein uS7 OS=Borrelia garinii subsp. bavariensis (strain ATCC BAA-2496 / DSM 23469 / PBi) OX=290434 GN=rpsG PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004083 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00177
all species →		Ribosomal_S7Ribosomal protein S7p/S5eDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000235
all species →		FamilySmall ribosomal subunit protein uS7Interproscan
IPR020606
all species →		Conserved_siteSmall ribosomal subunit protein uS7, conserved siteInterproscan
IPR036823
all species →		Homologous_superfamilySmall ribosomal subunit protein uS7 domain superfamilyInterproscan
IPR023798
all species →		DomainSmall ribosomal subunit protein uS7 domainInterproscan
IPR005717
all species →		FamilySmall ribosomal subunit protein uS7, bacterial/organellar-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11205
all species →		RIBOSOMAL PROTEIN S7Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006412
all species →		Biological ProcesstranslationInterproscan
GO:0000028
all species →		Biological Processribosomal small subunit assemblyInterproscan
GO:0003729
all species →		Molecular FunctionmRNA bindingInterproscan
GO:0003735
all species →		Molecular Functionstructural constituent of ribosomeInterproscan
GO:0005840
all species →		Cellular ComponentribosomeInterproscan
GO:0019843
all species →		Molecular FunctionrRNA bindingInterproscan
GO:0022627
all species →		Cellular Componentcytosolic small ribosomal subunitInterproscan
GO:0003723
all species →		Molecular FunctionRNA bindingInterproscan
GO:0015935
all species →		Cellular Componentsmall ribosomal subunitInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K02992RP-S7, MRPS7, rpsG; small subunit ribosomal protein S7-Ribosomeko03011deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP