Detailed information of evm.model.Contig133.500 in Hemicorallium imperiale

Genomic Location: Contig133:1063394...1064227
NR annotation: SLM12379.1, Ribosomal RNA small subunit methyltransferase A [uncultured spirochete]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q2YBP5Ribosomal RNA small subunit methyltransferase A OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849 / C 71) OX=323848 GN=rsmA PE=3 SV=1
Q9I5U5Ribosomal RNA small subunit methyltransferase A OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=rsmA PE=3 SV=1
Q1GZB8Ribosomal RNA small subunit methyltransferase A OS=Methylobacillus flagellatus (strain ATCC 51484 / DSM 6875 / VKM B-1610 / KT) OX=265072 GN=rsmA PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00398RrnaADRibosomal RNA adenine dimethylaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR023165Homologous_superfamilyrRNA adenine dimethylase-like, C-terminalInterproscan
IPR020598DomainRibosomal RNA adenine methylase transferase, N-terminalInterproscan
IPR029063Homologous_superfamilyS-adenosyl-L-methionine-dependent methyltransferase superfamilyInterproscan
IPR001737FamilyRibosomal RNA adenine methyltransferase KsgA/ErmInterproscan
IPR011530FamilyRibosomal RNA adenine dimethylaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11727DIMETHYLADENOSINE TRANSFERASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000154Biological ProcessrRNA modificationInterproscan
GO:0000179Molecular FunctionrRNA (adenine-N6,N6-)-dimethyltransferase activityInterproscan
GO:0006364Biological ProcessrRNA processingInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0031167Biological ProcessrRNA methylationInterproscan

TOP