Detailed information of evm.model.Contig133.510 in Hemicorallium imperiale

Genomic Location: Contig133:1086415...1087356
NR annotation: MBI9106056.1, ribonuclease Z [Spirochaetales bacterium]
Species abbreviation HIMPE · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Contig133.510 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q73LB4Ribonuclease Z OS=Treponema denticola (strain ATCC 35405 / DSM 14222 / CIP 103919 / JCM 8153 / KCTC 15104) OX=243275 GN=rnz PE=3 SV=1
O07896Ribonuclease Z OS=Treponema pallidum (strain Nichols) OX=243276 GN=rnz PE=3 SV=1
B2S457Ribonuclease Z OS=Treponema pallidum subsp. pallidum (strain SS14) OX=455434 GN=rnz PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005375 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00753
all species →		Lactamase_BMetallo-beta-lactamase superfamilyDomainInterproscan
PF12706
all species →		Lactamase_B_2Beta-lactamase superfamily domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013471
all species →		FamilyRibonuclease Z/BNInterproscan
IPR050094
all species →		FamilyZinc phosphodiesterase ELAC proteinInterproscan
IPR036866
all species →		Homologous_superfamilyRibonuclease Z/Hydroxyacylglutathione hydrolase-likeInterproscan
IPR001279
all species →		DomainMetallo-beta-lactamaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46018
all species →		ZINC PHOSPHODIESTERASE ELAC PROTEIN 1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016891
all species →		Molecular FunctionRNA endonuclease activity, producing 5'-phosphomonoestersInterproscan
GO:0042781
all species →		Molecular Function3'-tRNA processing endoribonuclease activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K00784rnz; ribonuclease ZEC:3.1.26.11
Transfer RNA biogenesisko03016deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP