Detailed information of evm.model.Contig133.60 in Hemicorallium imperiale

Genomic Location: Contig133:124172...125637
NR annotation: WP_230755485.1, ornithine carbamoyltransferase [Treponema zuelzerae]
Species abbreviation HIMPE · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Contig133.60 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8RCA4Ornithine carbamoyltransferase OS=Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) OX=273068 GN=argF PE=3 SV=1
A8F7Z9Ornithine carbamoyltransferase OS=Pseudothermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / NBRC 107922 / TMO) OX=416591 GN=argF PE=3 SV=1
A5IN78Ornithine carbamoyltransferase OS=Thermotoga petrophila (strain ATCC BAA-488 / DSM 13995 / JCM 10881 / RKU-1) OX=390874 GN=argF PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004629 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00185
all species →		OTCaceAspartate/ornithine carbamoyltransferase, Asp/Orn binding domainDomainInterproscan
PF02729
all species →		OTCace_NAspartate/ornithine carbamoyltransferase, carbamoyl-P binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002292
all species →		FamilyOrnithine/putrescine carbamoyltransferaseInterproscan
IPR036901
all species →		Homologous_superfamilyAspartate/ornithine carbamoyltransferase superfamilyInterproscan
IPR006130
all species →		FamilyAspartate/ornithine carbamoyltransferaseInterproscan
IPR006131
all species →		DomainAspartate/ornithine carbamoyltransferase, Asp/Orn-binding domainInterproscan
IPR006132
all species →		DomainAspartate/ornithine carbamoyltransferase, carbamoyl-P bindingInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45753
all species →		ORNITHINE CARBAMOYLTRANSFERASE, MITOCHONDRIALInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016743
all species →		Molecular Functioncarboxyl- or carbamoyltransferase activityInterproscan
GO:0006520
all species →		Biological Processamino acid metabolic processInterproscan
GO:0016597
all species →		Molecular Functionamino acid bindingInterproscan
GO:0004585
all species →		Molecular Functionornithine carbamoyltransferase activityInterproscan
GO:0019240
all species →		Biological Processcitrulline biosynthetic processInterproscan
GO:0042450
all species →		Biological Processarginine biosynthetic process via ornithineInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Contig133.60.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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