Detailed information of evm.model.Contig136.108 in Hemicorallium imperiale

Genomic Location: Contig136:268848...271959
NR annotation: MBP1526393.1, class 1b ribonucleoside-diphosphate reductase subunit alpha [Spiroplasma ixodetis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P78027Ribonucleoside-diphosphate reductase subunit alpha OS=Mycoplasma pneumoniae (strain ATCC 29342 / M129 / Subtype 1) OX=272634 GN=nrdE PE=3 SV=1
P47473Ribonucleoside-diphosphate reductase subunit alpha OS=Mycoplasma genitalium (strain ATCC 33530 / DSM 19775 / NCTC 10195 / G37) OX=243273 GN=nrdE PE=3 SV=1
P0CG99Ribonucleoside-diphosphate reductase subunit alpha 1 OS=Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155) OX=246196 GN=nrdE1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00317Ribonuc_red_lgNRibonucleotide reductase, all-alpha domainDomainInterproscan
PF00268Ribonuc_red_smRibonucleotide reductase, small chainDomainInterproscan
PF02867Ribonuc_red_lgCRibonucleotide reductase, barrel domainFamilyInterproscan
PF07972Flavodoxin_NdrINrdI Flavodoxin like DomainInterproscan
PF08343RNR_NRibonucleotide reductase N-terminalFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013509DomainRibonucleotide reductase large subunit, N-terminalInterproscan
IPR000358FamilyRibonucleotide reductase small subunit familyInterproscan
IPR000788DomainRibonucleotide reductase large subunit, C-terminalInterproscan
IPR012348Homologous_superfamilyRibonucleotide reductase-likeInterproscan
IPR013346DomainRibonucleotide reductase, class I, alpha subunit, C-terminalInterproscan
IPR008926Homologous_superfamilyRibonucleotide reductase R1 subunit, N-terminalInterproscan
IPR009078Homologous_superfamilyFerritin-like superfamilyInterproscan
IPR004465FamilyRibonucleotide reductase Class Ib, NrdIInterproscan
IPR029039Homologous_superfamilyFlavoprotein-like superfamilyInterproscan
IPR039718FamilyRibonucleoside-diphosphate reductase large subunitInterproscan
IPR013554DomainRibonucleotide reductase N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11573RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE LARGE CHAINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004748Molecular Functionribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptorInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0009263Biological Processdeoxyribonucleotide biosynthetic processInterproscan
GO:0016491Molecular Functionoxidoreductase activityInterproscan
GO:0010181Molecular FunctionFMN bindingInterproscan
GO:0036211Biological Processprotein modification processInterproscan
GO:0005971Cellular Componentribonucleoside-diphosphate reductase complexInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K00525E1.17.4.1A, nrdA, nrdE; ribonucleoside-diphosphate reductase alpha chainEC:1.17.4.1
DNA repair and recombination proteinsko03400deepkoala

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